Sequence of DPV Panicum mosaic virus

Panicum mosaic virus clone PMV-CP-5 capsid protein gene, complete cds.

ACC No: HM017843

Dated: 2012-10-23 | Length: 866 | CRC: -1382476741

                
ID   HM017843; SV 1; linear; genomic RNA; STD; VRL; 866 BP.
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AC   HM017843;
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DT   23-OCT-2012 (Rel. 114, Created)
DT   23-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE   Panicum mosaic virus clone PMV-CP-5 capsid protein gene, complete cds.
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KW   .
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OS   Panicum mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC   Panicovirus.
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RN   [1]
RP   1-866
RA   Thomas J.E., Steele V.;
RT   "First report of Panicum mosaic virus in buffalo grass (Stenotaphrum
RT   secundatum) from Australia";
RL   Australas. Plant Dis. Notes 6(1):16-17(2011).
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RN   [2]
RP   1-866
RA   Thomas J.E., Steele V.;
RT   ;
RL   Submitted (21-MAR-2010) to the INSDC.
RL   Agri-Science Queensland, DEEDI, 80 Meiers Road, Indooroopilly, Qld 4068,
RL   Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .866
FT                   /organism="Panicum mosaic virus"
FT                   /host="Stenotaphrum secundatum voucher BRIP 53087 a"
FT                   /isolate="2349"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collection_date="11-Jun-2008"
FT                   /clone="PMV-CP-5"
FT                   /db_xref="taxon:40279"
FT   CDS             48. .776
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /protein_id="ADL27921.1"
FT                   /translation="MNRNGAASTRGRGKRAVPNAPRRRARGKSVERGSTPLQYVTTLGP
FT                   SQPRMGQGQGWQKLSHEEIILQVNATTTADTIQTIPVIPRLSVPTGDKPIFSGSAPHLR
FT                   TIGSAFALHRWRALSFEWIPSCPTTTPGNLVLRFYPSYSTTTPTSLTDLMDSESLVLVP
FT                   SLSGKTYRPKIETRGSPPELRNIDATAFSALSDEDKGDYSVGRLVIGSSKQAATIQLGL
FT                   VRMKYSIEMRGATSTSGVSA"
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SQ   Sequence 866 BP; 231 A; 253 C; 210 G; 172 T; 0 other;

hm017843 Length: 866  23-OCT-2012  Type: N  Check: 1451  ..

       1  aacaccacat atcaccacga gaaataccaa aacattgaaa tccagaaatg
      51  aaccgtaatg gagctgcctc caccagagga cgtggtaagc gcgcagtacc
     101  taacgcccct cgccgtcgtg cgagaggtaa gtctgtggaa cggggctcca
     151  cccccctaca gtatgttaca actctgggcc cgtcccagcc gagaatgggc
     201  caaggacaag gttggcagaa gttatcccac gaggaaatca tacttcaagt
     251  caacgcaact actaccgcgg acacaattca gactatacca gtcataccgc
     301  gattgtccgt gcctacagga gacaagccca ttttctcagg aagcgctcca
     351  catttgcgta caattggatc cgccttcgcc ctccacagat ggagggccct
     401  ctcgtttgag tggatcccga gctgtcctac aacgacaccg ggaaatctgg
     451  ttttgaggtt ttacccgagt tacagcacca caactccaac ctcactcaca
     501  gatctcatgg acagcgaatc cctcgtgttg gtaccgtcac tatccggcaa
     551  gacatatagg ccgaagatag agacacgagg atccccacca gaactgcgca
     601  acattgatgc caccgctttc tccgctctca gcgacgaaga caagggtgac
     651  tattcggtgg gaagactggt cattggctcc agtaagcaag ctgcaactat
     701  acagcttggc ctcgttcgca tgaaatactc aatagaaatg cgcggggcga
     751  cctccacaag tggggtcagc gcataaaccc attctagggt tatcacaggc
     801  taggaccggc cgtataaagg ttcgacttgg tgtgcagctg ctccggtgca
     851  cctcgtatag cagcgc