Sequence of DPV Pedilenthus leaf curl virus

Pedilanthus leaf curl virus-Naj 1[India:New Delhi:Papaya:2008] coat protein gene, complete cds.

ACC No: HM134231

Dated: 2012-07-04 | Length: 771 | CRC: 1318463147

                
ID   HM134231; SV 1; linear; genomic DNA; STD; VRL; 771 BP.
XX
AC   HM134231;
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DT   31-OCT-2010 (Rel. 106, Created)
DT   04-JUL-2012 (Rel. 113, Last updated, Version 4)
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DE   Pedilanthus leaf curl virus-Naj 1[India:New Delhi:Papaya:2008] coat protein
DE   gene, complete cds.
XX
KW   .
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OS   Pedilanthus leaf curl virus-Naj 1[India:New Delhi:Papaya:2008]
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC   unclassified Begomovirus.
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RN   [1]
RP   1-771
RX   PUBMED; 22437254.
RA   Singh-Pant P., Pant P., Mukherjee S.K., Mazumdar-Leighton S.;
RT   "Spatial and temporal diversity of begomoviral complexes in papayas with
RT   leaf curl disease";
RL   Arch. Virol. 157(7):1217-1232(2012).
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RN   [2]
RP   1-771
RA   Singh P., Mukherjee S.K., Mazumdar-Leighton S.;
RT   ;
RL   Submitted (19-APR-2010) to the INSDC.
RL   Department of Botany, University of Delhi, Lab #15, Ground Floor, North
RL   Campus, Chattra Marg., New Delhi 110007, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .771
FT                   /organism="Pedilanthus leaf curl virus-Naj 1[India:New
FT                   Delhi:Papaya:2008]"
FT                   /host="Carica papaya"
FT                   /isolate="Najafgarh-1"
FT                   /mol_type="genomic DNA"
FT                   /country="India:New Delhi"
FT                   /isolation_source="leaf"
FT                   /collection_date="Dec-2008"
FT                   /db_xref="taxon:1037425"
FT   CDS             1. .771
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="involved in encapsidation"
FT                   /db_xref="GOA:E3U9H2"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:E3U9H2"
FT                   /protein_id="ADO95320.1"
FT                   /translation="MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPIVRVTKARAWT
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGIGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNVHRDRYQVLRKWHATVTGGLYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT                   TENALMLYMACTHASNPVYATLKIRIYFYDSVSN"
XX
SQ   Sequence 771 BP; 201 A; 159 C; 208 G; 203 T; 0 other;

hm134231 Length: 771  04-JUL-2012  Type: N  Check: 590  ..

       1  atgtcgaagc gaccagcaga tatcatcatt tcaacgcccg cctcgaaggt
      51  acgccgccgt ctcaacttcg acagcccata tgcgagtcgt gctgctgccc
     101  ccattgtccg cgtcacaaag gcaagggcct ggaccaacag gcccatgaac
     151  cgaaagccca ggatgtacag gatgtacaga agcccagatg ttccgagggg
     201  ctgtgaaggc ccatgtaagg tccagtcatt tgagtccaga catgatatcc
     251  agcacattgg taaagtcatg tgtgttagtg atgttactcg tggtattggg
     301  ctgacccaca gggttggcaa gaggttctgt gtgaagtccg tttatgtttt
     351  gggcaagatc tggatggatg agaacatcaa gactaagaat catacgaata
     401  gtgttatgtt tttccttgtt agggatcgta ggcccgttga taagcctcaa
     451  gattttggtg aggtttttaa catgtttgat aatgagccca gcacggcgac
     501  tgtgaagaat gttcatcgtg acagatatca ggtgttaagg aagtggcatg
     551  ccactgtgac aggcggtctg tacgcatcga aggagcaggc tctcgtgaag
     601  aagtttgtta gggtcaataa ttatgttgtg tacaaccagc aagaggctgg
     651  caagtatgag aatcatactg agaatgcatt gatgttgtat atggcgtgta
     701  cgcacgcctc taaccctgtg tatgctacat tgaagatacg gatctacttt
     751  tatgattccg tttcgaatta a