Sequence of DPV Pedilenthus leaf curl virus
Pedilanthus leaf curl virus-Naj 1[India:New Delhi:Papaya:2008] coat protein gene, complete cds.
ACC No: HM134231
Dated: 2012-07-04 | Length: 771 | CRC: 1318463147
ID HM134231; SV 1; linear; genomic DNA; STD; VRL; 771 BP. XX AC HM134231; XX DT 31-OCT-2010 (Rel. 106, Created) DT 04-JUL-2012 (Rel. 113, Last updated, Version 4) XX DE Pedilanthus leaf curl virus-Naj 1[India:New Delhi:Papaya:2008] coat protein DE gene, complete cds. XX KW . XX OS Pedilanthus leaf curl virus-Naj 1[India:New Delhi:Papaya:2008] OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-771 RX PUBMED; 22437254. RA Singh-Pant P., Pant P., Mukherjee S.K., Mazumdar-Leighton S.; RT "Spatial and temporal diversity of begomoviral complexes in papayas with RT leaf curl disease"; RL Arch. Virol. 157(7):1217-1232(2012). XX RN [2] RP 1-771 RA Singh P., Mukherjee S.K., Mazumdar-Leighton S.; RT ; RL Submitted (19-APR-2010) to the INSDC. RL Department of Botany, University of Delhi, Lab #15, Ground Floor, North RL Campus, Chattra Marg., New Delhi 110007, India XX FH Key Location/Qualifiers FH FT source 1. .771 FT /organism="Pedilanthus leaf curl virus-Naj 1[India:New FT Delhi:Papaya:2008]" FT /host="Carica papaya" FT /isolate="Najafgarh-1" FT /mol_type="genomic DNA" FT /country="India:New Delhi" FT /isolation_source="leaf" FT /collection_date="Dec-2008" FT /db_xref="taxon:1037425" FT CDS 1. .771 FT /codon_start=1 FT /product="coat protein" FT /note="involved in encapsidation" FT /db_xref="GOA:E3U9H2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E3U9H2" FT /protein_id="ADO95320.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPIVRVTKARAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGIGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGLYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVSN" XX SQ Sequence 771 BP; 201 A; 159 C; 208 G; 203 T; 0 other; hm134231 Length: 771 04-JUL-2012 Type: N Check: 590 .. 1 atgtcgaagc gaccagcaga tatcatcatt tcaacgcccg cctcgaaggt 51 acgccgccgt ctcaacttcg acagcccata tgcgagtcgt gctgctgccc 101 ccattgtccg cgtcacaaag gcaagggcct ggaccaacag gcccatgaac 151 cgaaagccca ggatgtacag gatgtacaga agcccagatg ttccgagggg 201 ctgtgaaggc ccatgtaagg tccagtcatt tgagtccaga catgatatcc 251 agcacattgg taaagtcatg tgtgttagtg atgttactcg tggtattggg 301 ctgacccaca gggttggcaa gaggttctgt gtgaagtccg tttatgtttt 351 gggcaagatc tggatggatg agaacatcaa gactaagaat catacgaata 401 gtgttatgtt tttccttgtt agggatcgta ggcccgttga taagcctcaa 451 gattttggtg aggtttttaa catgtttgat aatgagccca gcacggcgac 501 tgtgaagaat gttcatcgtg acagatatca ggtgttaagg aagtggcatg 551 ccactgtgac aggcggtctg tacgcatcga aggagcaggc tctcgtgaag 601 aagtttgtta gggtcaataa ttatgttgtg tacaaccagc aagaggctgg 651 caagtatgag aatcatactg agaatgcatt gatgttgtat atggcgtgta 701 cgcacgcctc taaccctgtg tatgctacat tgaagatacg gatctacttt 751 tatgattccg tttcgaatta a