Sequence of DPV Potato virus Y

Potato virus Y isolate FA.OG.O polyprotein gene, partial cds; and 3' UTR.

ACC No: HM243474

Dated: 2011-06-21 | Length: 1133 | CRC: 283572809

                
ID   HM243474; SV 1; linear; genomic RNA; STD; VRL; 1133 BP.
XX
AC   HM243474;
XX
DT   29-DEC-2010 (Rel. 107, Created)
DT   21-JUN-2011 (Rel. 109, Last updated, Version 3)
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DE   Potato virus Y isolate FA.OG.O polyprotein gene, partial cds; and 3' UTR.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1133
RX   DOI; 10.1007/s11262-010-0546-8.
RX   PUBMED; 21082231.
RA   Hosseini A., Massumi H., Heydarnejad J., Hosseini Pour A., Varsani A.;
RT   "Characterisation of potato virus Y isolates from Iran";
RL   Virus Genes 42(1):128-140(2011).
XX
RN   [2]
RP   1-1133
RA   Massumi H., Hosseini A., Heydarnejad J., Hosseini Pour A.;
RT   ;
RL   Submitted (19-MAY-2010) to the INSDC.
RL   Department of Plant Protection, Shahid Bahonar University of Kerman,
RL   Kerman, Iran
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1133
FT                   /organism="Potato virus Y"
FT                   /host="potato"
FT                   /isolate="FA.OG.O"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran"
FT                   /note="isolated between Jan-2005 and Jul-2007"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .804
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein"
FT                   /db_xref="GOA:E7CN38"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E7CN38"
FT                   /protein_id="ADU17161.1"
FT                   /translation="ANDTIDAGESSKKDARPEQGSIQSNLNKGKDKDVNAGTSGTHTVP
FT                   RIKAITSKMRMPTSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVRMAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGNEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLIRNLRDMGLARYAWGPYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
XX
SQ   Sequence 1133 BP; 347 A; 214 C; 282 G; 290 T; 0 other;

hm243474 Length: 1133  21-JUN-2011  Type: N  Check: 5762  ..

       1  gcaaatgaca caatcgatgc aggagaaagc agcaagaaag atgcaagacc
      51  agagcaaggc agcatccagt caaacctgaa caaaggaaaa gataaggatg
     101  tgaatgctgg tacatctggg acacacactg tgccgagaat caaggctatc
     151  acgtccaaaa tgagaatgcc cacaagcaag ggagcaaccg tgctaaactt
     201  agaacacttg cttgagtatg ctccacaaca aattgatatt tcaaatactc
     251  gggcaactca atcgcagttt gatacgtggt atgaggcagt gcggatggca
     301  tacgacatag gagaaactga gatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa tgtcaacgga gtttgggtta
     401  tgatggatgg gaatgaacaa gtcgagtacc cgttgaaacc aatcgttgag
     451  aatgcaaaac caacccttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttaat tcgaaatctg cgggatatgg gtcttgcgcg ttatgcctgg
     601  ggcccttatg aggtcacatc acgaacacca gtgagggcta gggaagcgca
     651  cattcaaatg aaggccgcag cattgaaatc agcccaacct cgacttttcg
     701  ggttggacgg tggcatcagt acacaagagg agaacacaga gaggcacacc
     751  accgaggatg tctcaccaag tatgcatact ctacttggag ttaagaacat
     801  gtgatgtagt gtctctccgg acgatatata agtatttaca tatgcagtaa
     851  gtattttggc ttttcctgta ctacttttat cataattaat aatcagtttg
     901  aatattacta atagatagag gtggcagggt gatttcgtca ttgtggtgac
     951  tctatctttt aattccgcat tattaagtct tagataaaag tgccgggttg
    1001  tcgttgttgt ggatgattca tcgattaggt gatgttgcga ttctgtcgta
    1051  gcagtgacta tgtctggatc tatctgcttg ggtggtgttg tgatttcgtc
    1101  ataacagtga ctgtaaactt tcaatcagga gac