Sequence of DPV Aguacate virus
Aguacate virus strain VP-175A segment M, complete sequence.
ACC No: HM566137
Dated: 2011-05-27 | Length: 4185 | CRC: 180258076
ID HM566137; SV 1; linear; genomic RNA; STD; VRL; 4185 BP.
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AC HM566137;
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DT 20-APR-2011 (Rel. 108, Created)
DT 27-MAY-2011 (Rel. 109, Last updated, Version 2)
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DE Aguacate virus strain VP-175A segment M, complete sequence.
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KW .
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OS Aguacate virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus;
OC unclassified Phlebovirus.
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RN [1]
RP 1-4185
RX PUBMED; 21325481.
RA Palacios G., Travassos da Rosa A., Savji N., Sze W., Wick I., Guzman H.,
RA Hutchison S., Tesh R., Lipkin W.I.;
RT "Aguacate virus, a new antigenic complex of the genus Phlebovirus (family
RT Bunyaviridae)";
RL J. Gen. Virol. 92(PT 6):1445-1453(2011).
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RN [2]
RP 1-4185
RA Palacios G., Savji N., Sze W., Hutchinson S., Tesh R.,
RA Travassos da Rosa A., Lipkin W.;
RT ;
RL Submitted (19-JUN-2010) to the INSDC.
RL Center for Infection and Immunity, Columbia University, 722 West 168th
RL Street, 17th Floor, New York, NY 10032, USA
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CC GenBank Accession Numbers HM566137-HM566139 represent the complete
CC genome of Aguacate virus strain VP-175A.
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FH Key Location/Qualifiers
FH
FT source 1. .4185
FT /organism="Aguacate virus"
FT /segment="M"
FT /host="Lutzomyia sp."
FT /strain="VP-175A"
FT /mol_type="genomic RNA"
FT /note="serogroup: Aguacate"
FT /db_xref="taxon:1006583"
FT gene 24. .3986
FT /gene="GP"
FT CDS 24. .3986
FT /codon_start=1
FT /gene="GP"
FT /product="glycoprotein"
FT /protein_id="AEB70968.1"
FT /translation="MKNYNILFLLSIVAARLVLHYSTPHLNNKICFSSGTPELHITNYW
FT MEAMEKFPVDNKKCELGDGVFSSVTLDDMPPFIKAMTTSDEALRFTCIGSNDSYIAELT
FT TDGDVIPGESHSIIDCKTGETEVVLSPVNVAPAGLKVQDLVDHDREVDAVLLQRDQLIE
FT ELRTRLRDSKIREESAKEKSKQLTEELDTMKKDIDKFKGRTDELILHLESERLESRISR
FT NKSRWLEHELKDAKEDVIRLQNDMLREPKKKSSSERTTKASLKTVLLYTTTMIPLLLGQ
FT TDATKALGKTRAKCSHARNRIGSGKNSITGITSPTCSSIDYELRCDSLEILMMDDIYPF
FT ASSHIHKQTILEAVNDGFIEQVNDGVCQLDNDRPPKCFENRSKMRPHCPNGFRASHYLD
FT DEGKLRGLYCKEDSEVTEDCLNCRKLKSKPQKQGSIQMQDAMCQNVTVPYKGPLPAPRG
FT YCKVGLKKYKSCKTSHTEVRHVPFMILKGSGKVYLDSLILKNNEESDISSFLCYKNKGQ
FT YNTGDGVEARVYKSVKITECSNVDSSKTTKCTGDHVFCSKFKCEETYPEVQCIVAPGAG
FT PVMVRYAGGWVLPVCFGYENTIVELDIQTGSQLTEEECDSCVYSCDPDGVRIRTTGFKV
FT DAVIACASGHCSTYSQKPSTNVFFQYPGMSYGDGSTIGVHLSHDDDTISSHMIVQCEAK
FT DPCMINTCIICTHTLINYQCHTFLSAFVCTLLLLSIALIMLLIIKRTTKTVKSLPRMMT
FT APIHWLRLLIKWVSNRVRQCFRRQVENINAEIGWRGPPQRVVPIPRYTGFMAIILFLIV
FT VVDGCSETVISDSKITKCSSVGSVTTCILTGSVVLQAGTIGTESCLIVKTPSGQKSHMS
FT IKTVSSELVCREGDSYWTSNYVPKCLSSRRCYWVGECHSTNCQAWSNDMVSSEFLKFGN
FT ETKLSENRCFEQCGGISCGCFNMNPSCLFVHSNLESISRKALRAFSCSDWSHRVTFEIT
FT DIKGLKEKFTLFDTGSKFFSWGSVSLGLDAESITGSNSFSFLHDPSSGFALIDEEFSTT
FT PRSGFVGEVRCSSELAAVSAHKSCKWAPDLIKYRPVTDYVECSSNLIDPFVLFKRGFLP
FT QSRNGKMYTQSIDKKSVQAVSALSIRATLRLLMEGLEVHFEERVANCKAAMRNITGCYS
FT CNEGAKICLSISTDQNSSLYAESSSGIHIAFPVSTGVSDYCSIVHFNDPSVEEILKYSC
FT GGTDKELHISGTLLSVEPHNDRNKQSSGSVVVNPREVSWNFFSWVSGLIKFLGGPLKTA
FT MIVIGLIILSCIVIAIIIFAARSGLLSGLFSKAKAL"
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SQ Sequence 4185 BP; 1289 A; 808 C; 962 G; 1126 T; 0 other;
hm566137 Length: 4185 27-MAY-2011 Type: N Check: 1632 ..
1 acacaaagac ggcgcatatt ttaatgaaaa actacaatat cttattttta
51 ttgagtatag tggctgctag actggtcttg cactactcta caccacatct
101 caacaacaag atctgcttta gctcaggaac tccggagcta cacatcacca
151 actactggat ggaagccatg gagaaatttc ctgttgacaa taagaagtgt
201 gagctgggag atggggtctt ttcatcagtc acactggatg atatgcctcc
251 tttcattaaa gcaatgacaa cttctgatga agccctaaga tttacgtgta
301 taggatccaa cgatagctac atagctgagc tgacaacaga cggcgatgtt
351 attcctggag agagccattc tatcatagat tgtaagactg gcgaaacaga
401 agttgtactg tctcctgtta atgtggcacc agcaggcctt aaggtccaag
451 acttggtcga tcatgacaga gaggttgatg cagtgttgct acaaagagac
501 cagttgatag aggagttacg tactagacta agagacagca aaatcagaga
551 agagtcagca aaagagaaga gtaagcagct gactgaggag ctagacacta
601 tgaagaaaga catagacaaa ttcaagggga ggacagatga actaatcttg
651 cacttagaaa gtgagaggtt ggagagtaga atcagtagga acaagtcacg
701 atggcttgaa catgaactaa aggatgcaaa agaagatgtg ataagattac
751 agaatgatat gctcagagaa ccgaaaaaga aatccagctc tgaaaggaca
801 accaaagcat ccctcaagac ggttctgtta tatacaacaa cgatgatacc
851 tctgctacta ggacagaccg acgccaccaa ggctcttggg aagactaggg
901 cgaaatgctc gcatgctaga aacagaatag gtagtgggaa gaattctatt
951 actggtataa catcaccaac ttgctcatct atagattatg aattacgctg
1001 tgactcccta gaaattctga tgatggatga catatatccc tttgcatcat
1051 ctcacataca taaacaaaca atacttgaag ctgtcaatga tgggtttatc
1101 gagcaagtca atgatggggt atgccagtta gataacgaca ggcccccaaa
1151 gtgtttcgaa aatagaagta aaatgagacc acactgccca aatggcttcc
1201 gtgcctctca ctatctagat gatgagggta aacttagagg gctgtactgt
1251 aaagaagact cagaagtcac agaagactgt ttgaactgca gaaagctgaa
1301 gtctaagcct cagaagcagg gaagcattca aatgcaagat gccatgtgcc
1351 aaaatgtcac agtgccatac aaaggacctt tgcctgctcc aaggggttat
1401 tgcaaggttg gccttaagaa atacaaaagt tgtaagacat cccatactga
1451 ggtcaggcat gttccattca tgatactaaa gggatcagga aaagtgtact
1501 tggactcctt aatcctaaaa aacaatgagg agtctgacat ttcttcattc
1551 ctttgttata agaacaaagg tcaatacaac acaggtgatg gagtggaagc
1601 tcgtgtttat aagtctgtca aaattactga atgctccaat gttgactctt
1651 caaaaactac aaaatgtaca ggagaccatg ttttttgtag taagttcaag
1701 tgtgaggaga catatccaga agtgcaatgc attgttgccc caggagcagg
1751 ccctgtcatg gttaggtatg ctggaggatg ggtcctgcca gtatgctttg
1801 gttacgagaa taccatagtg gagctggaca tacaaactgg atcacaactc
1851 actgaggaag aatgtgattc ctgcgtgtac agctgcgacc ctgatggtgt
1901 aaggataagg acaactggat tcaaggtgga tgctgtgata gcttgtgcta
1951 gtggacattg ctcaacctac tctcagaagc cttccaccaa tgtctttttt
2001 cagtatcccg gaatgtctta tggtgatggg tcaacaattg gagttcatct
2051 gtcgcatgat gatgacacaa tcagctctca tatgatagtg caatgtgaag
2101 cgaaagatcc ttgtatgatc aacacatgta tcatatgcac acatacgcta
2151 attaactacc aatgccacac ctttttgagt gcatttgtgt gtaccctgct
2201 tttgctgtct atagcactaa taatgctttt gataataaag agaaccacaa
2251 aaactgtgaa atctttgccc aggatgatga cagcaccaat acattggcta
2301 agattgctaa ttaaatgggt atctaacaga gtcaggcaat gtttcagaag
2351 gcaagtggag aatataaatg ccgaaattgg ttggagaggc cctccacaga
2401 gggttgttcc aatccctcga tatacagggt tcatggctat tatactattt
2451 ctgattgtgg ttgtagatgg gtgctcagaa acagtgatct ctgactctaa
2501 aataactaag tgttcctcag ttgggtcagt aacaacctgt attctgactg
2551 ggtcagtggt cctgcaggct ggaacgatag gtacagagtc ttgtttgata
2601 gtgaaaaccc cctcaggtca aaagtctcac atgtcaatca aaactgtgtc
2651 aagtgagctt gtgtgcagag aaggggattc ctactggaca tcaaattatg
2701 ttcccaagtg tttaagctca aggaggtgct actgggttgg cgaatgccat
2751 tcaaccaatt gtcaagcatg gtccaatgac atggtatcat ctgaattctt
2801 gaagtttggt aacgaaacca aattaagtga aaacaggtgt tttgaacaat
2851 gtggtgggat ttcttgtggg tgttttaata tgaatccttc atgcctgttt
2901 gtccactcaa acctggaatc aatatcaaga aaggcactac gagcattttc
2951 atgctcagac tggtctcaca gagtgacgtt tgaaatcaca gacataaagg
3001 gcctgaagga aaaatttacc ttatttgaca caggttccaa gttcttttca
3051 tggggatccg tgagtctagg attagatgca gagtccatta caggatctaa
3101 ttccttctcc tttctgcatg atcctagttc aggatttgcc ctgatagatg
3151 aggaattctc aaccacccca aggtcaggat ttgtaggaga agttaggtgt
3201 tcatctgaac tggcagctgt ctcagctcat aagtcatgca aatgggcacc
3251 tgatctcatt aagtatagac ctgtgacaga ttatgtagag tgctcctcaa
3301 atctgattga cccctttgtg ctgtttaaaa gaggatttct gccacagtca
3351 aggaacggca agatgtacac tcagtccata gataagaaat cagtgcaagc
3401 agtgtctgcc cttagtataa gggctacgtt acggttgtta atggaaggtc
3451 tagaagttca ctttgaagaa agggtagcca actgcaaggc tgctatgagg
3501 aatattacag gatgctactc gtgcaatgaa ggagcaaaaa tttgcttaag
3551 catatcaact gatcagaatt ccagcttata tgcagaatct agctctggta
3601 ttcacattgc attccctgtt tctacaggag tgagtgatta ctgtagcata
3651 gttcacttta atgacccatc tgttgaagaa attctgaagt actcgtgtgg
3701 aggaacagat aaggagctac acatttctgg aacactattg tcagtagagc
3751 cccataatga tagaaacaag cagtcatctg ggtctgttgt tgtgaaccca
3801 cgtgaggtta gctggaattt cttttcttgg gtctcaggat tgatcaaatt
3851 cttaggaggg ccattgaaaa ctgctatgat agttatagga ctgattattc
3901 tgtcctgtat tgtgatagca atcatcatct ttgcagcccg tagcggtctc
3951 ctaagtggac tgttttctaa agccaaggct ctataattca ccaactcaaa
4001 tcaccactca tcacacataa cactccataa aactcagctg gcagcacaca
4051 ggtccgcagt atatgattga taaatatgtg tcagtttaga gagtatggct
4101 ttgcgtaatg ttggcaggag agctgtctgt agcaagaaag cagtgtggga
4151 ttattatttt acttggaaag cgccggtctt tgtgt