Sequence of DPV Aguacate virus
Aguacate virus strain VP-175A segment L, complete sequence.
ACC No: HM566138
Dated: 2011-05-27 | Length: 6393 | CRC: -1317132883
ID HM566138; SV 1; linear; genomic RNA; STD; VRL; 6393 BP.
XX
AC HM566138;
XX
DT 20-APR-2011 (Rel. 108, Created)
DT 27-MAY-2011 (Rel. 109, Last updated, Version 2)
XX
DE Aguacate virus strain VP-175A segment L, complete sequence.
XX
KW .
XX
OS Aguacate virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus;
OC unclassified Phlebovirus.
XX
RN [1]
RP 1-6393
RX PUBMED; 21325481.
RA Palacios G., Travassos da Rosa A., Savji N., Sze W., Wick I., Guzman H.,
RA Hutchison S., Tesh R., Lipkin W.I.;
RT "Aguacate virus, a new antigenic complex of the genus Phlebovirus (family
RT Bunyaviridae)";
RL J. Gen. Virol. 92(PT 6):1445-1453(2011).
XX
RN [2]
RP 1-6393
RA Palacios G., Savji N., Sze W., Hutchinson S., Tesh R.,
RA Travassos da Rosa A., Lipkin W.;
RT ;
RL Submitted (19-JUN-2010) to the INSDC.
RL Center for Infection and Immunity, Columbia University, 722 West 168th
RL Street, 17th Floor, New York, NY 10032, USA
XX
CC GenBank Accession Numbers HM566137-HM566139 represent the complete
CC genome of Aguacate virus strain VP-175A.
XX
FH Key Location/Qualifiers
FH
FT source 1. .6393
FT /organism="Aguacate virus"
FT /segment="L"
FT /host="Lutzomyia sp."
FT /strain="VP-175A"
FT /mol_type="genomic RNA"
FT /note="serogroup: Aguacate"
FT /db_xref="taxon:1006583"
FT gene 20. .6277
FT /gene="L"
FT CDS 20. .6277
FT /codon_start=1
FT /gene="L"
FT /product="polymerase"
FT /protein_id="AEB70969.1"
FT /translation="MNEILQNQPLSQDQYFCRAVAHYDDEIFGLAILDFTIREDCGLVI
FT VDLDLDGRGEWSTIGSTVKDQIKLNPQNLPNFVHDFTFGHLANSTDSPFVSFFPAVGDG
FT FDHLTPDVMIRMPSGRTHIIEFTTFRGTSQGAQQAALLKIGKYESACERRSRISPVTFS
FT VISVHRYGVWTNLDLSEEQVNELVYRFRLAVSIFEEMKVMFPELSLVDEELSKTEREVL
FT GIVSTIKMDWERTEKTFPHFKREMFENFRQSEPDFDYISSIISRCIGESEESILKENYF
FT ELQNLQLRLRENGRQCEKALSAFSSEMASGDLRDVNDPKSTVQIPPWVTIEGPEGKDLI
FT PLKSLEINGDHPMQRIWSKVCNSASLELIDRMVDDPESELQHAISGTRDRADERSRYHR
FT VIVELDSAELEYAATLGVGGKKYRDHHSSREARTRSKRGFSLDHNIKSLERFISGCTQE
FT LLEEGDYYKPLLEDMPLRIEAQRIHQPTYTRNNGENEFLRNHRLFMETPLGSWSQMVSL
FT IGAELSASVKQHVKQKSFIVKRLLGSGIYLLIKPTNSKSHIFVSYALDKLYWSHDLSSG
FT TEFKRYLDSGDLFITEFTSYKLSKLTNLCKCCSLLESSLSFWTEAYHEKPWLSVDVIRD
FT GRQPEILTMTKLSLLTLLEDKARTEELQTLLRYVVMEGFVSQPELPRPQKMISKLPRVL
FT RTELQVLLVQRVMTSISRIAANPFKLKKSDGSISWSGLFNPLSGSKLLDLQPLISCCYN
FT GYFKNKEEETEPSALSAMYKKIIELEHLKPGTDEFLGWGDPEDPKTHEFSRSYLKEVCE
FT HGKAILKRMYGHNVLQQIDDQITREISSLTIERLATLKATSNFDENWYVYKDCKDKNYT
FT RDKLLVKMSQFASEGKTLAIEKFEDCMTSIESRGAMHICLFKKQQHGGLREIYVMGAEE
FT RIVQSVVECIAKTVGKFFSSDTLCNPNNKSRIPESHAHRARKHCRSSVWTCATSDDAKK
FT WNQGHFVTKFAMMLCEFTSPKWWPIIIRGCSMFTRKFMMMNMRYLDILNGHRELKVDDE
FT FVMTLFNAYHGEVEVPWLEKGRTYLQTTTGMMQGILHSTSSLLHTLHQEFVRSLSFKVF
FT NMKVQPDMGSKVVCDVMQGSDDSSMIISFPANEDSTFMKCKMAAAMCFRVKKTLGLYLG
FT IYPSEKSTSNTDFVMEYNSEFFFHTSHVRPLVRWVSSCCSLPEVETLVARQEEASNLLT
FT SISEGGGSFALSAMIQQSQCTIHYQLIGMGVSSIFPHYRRALARWKDPGLGFFLLDNPY
FT AAGLGGFRFNLFKAITMTELQKVYAYFMRKVKDNSLPEEEGVLVPETCSVSPGGAIIMS
FT SSLKWGSRKKFSRLRDRLNIPENWVELINDNPEVLYRAPRTGEEIILRIAEKVHSPGVV
FT SSLSTGNAVCKVMASSVYFLSAAIFEDSGRPEFSYLDNSKYSILQKMMAYEGFNGSHDI
FT DPEDILFLFPNVEELEQLDMIIYDKGPIDLVERVSSREATQSRVVVFDEKRCMRVSPEK
FT LVSDKWFGTQKSKIGRTAFEVEWAKLTRVIRWLKDTPEGTMEKSPLSNQIQIRNFFARL
FT EGRSRCVRITGAPVKKRSGMSKLALVIRDNFCKTGHLRGIEDISGSSRSVSVEVLRHIL
FT FSVLQGPYSDESKLDLSIKSLSSSSEIELRENDGKTKANILSILQSYIWADRGVIQKIE
FT RAGAGTVGGFIKPQKSYKDGQTIKYYGHGIWRGMMDGIDMQIDIDNKRNQNPQITSIRV
FT AGTKSPWVVCQSLKIWCEDMGVKNSADFSESVRRTPKFWLSNFRMFGGNHPLGAPVYIL
FT DGRMDDLREIRDEDILIKVRRGTLNLFVKSRGGSEMHILSYTSSDTDLSPSMVKEAELS
FT MPGLMNLFSREPSRSWVSCSPLPVQYTEVLLDVCEGLKRVDRINPIRLSEIIRICTDSS
FT LRTKVGTVYSMQQFSEEAQIIDCDDLLDIMIEDIKTGAFSEVVRKMEDEVKGDNEDLDF
FT DYDDINLFGPAHHKEYGELSLVSHPLMDKFVDNAISIMGRSSLRRLLELGVTKTRYLKI
FT SRLVYRAIGRNVDAIKTDDFSLEDQPSISEDMLG"
XX
SQ Sequence 6393 BP; 2032 A; 1125 C; 1566 G; 1670 T; 0 other;
hm566138 Length: 6393 27-MAY-2011 Type: N Check: 1611 ..
1 acacaaagaa gcccacatca tgaatgaaat attacagaat caacctttaa
51 gtcaagatca gtacttctgt agagcagtgg cccactatga cgatgagatt
101 tttgggctag caatccttga tttcaccata agagaagact gtgggttagt
151 cattgtagat ttggatctag atgggagagg tgaatggagc accattggat
201 caactgttaa agaccagata aaattaaacc ctcagaatct ccctaatttt
251 gttcatgatt tcacatttgg ccatttagca aacagtacag atagtccttt
301 tgttagcttc tttccagcag taggagacgg atttgaccac ttgacaccgg
351 atgtgatgat cagaatgcct tcaggacgca cccacataat agaattcaca
401 actttcagag ggacatccca aggagcacag caagctgctc ttctgaagat
451 tggaaaatat gagtcagcat gtgagaggag gagcagaatt agtccagtca
501 ctttctcagt gatttctgtt catagatatg gagtatggac aaaccttgac
551 ttaagtgagg agcaggtgaa tgagcttgta tacagattca ggttggcagt
601 gagcatattt gaggagatga aagtgatgtt ccctgagctg tctctggttg
651 atgaagagct gagcaaaaca gagagagaag tgctaggcat tgtgtcaact
701 attaaaatgg attgggagag gactgagaag actttccctc actttaagag
751 agaaatgttt gagaatttca gacagtcaga accagacttt gattatatat
801 catcaataat atccagatgt attggtgaat cagaagagtc tatcttgaaa
851 gaaaactact ttgaactgca gaatttgcaa cttagactaa gggagaatgg
901 gaggcaatgt gagaaggcat tgagtgcctt ctcaagtgag atggcatctg
951 gagatctgcg agatgttaat gaccctaaat ctacagtcca aattcctccc
1001 tgggtcacaa ttgaaggccc tgaagggaaa gatctaatac cactgaagtc
1051 tttggaaatc aatggggatc atccaatgca gagaatctgg tccaaagttt
1101 gtaattcagc atctttagaa ctgatagaca ggatggtgga tgatcctgag
1151 tctgagttac aacatgccat ttccgggact agagatcggg cggatgaaag
1201 gagcagatat catagggtaa ttgtcgaatt ggatagtgcg gaactagaat
1251 atgctgcaac actcggagtt ggaggtaaga aatacagaga ccatcattca
1301 tcaagagaag caaggacccg cagtaagagg ggcttttccc tagaccacaa
1351 tataaagtcc ttagagaggt tcatatcagg atgcacccaa gagctgttag
1401 aggagggtga ctactacaaa cccctgctgg aggatatgcc cttaaggatt
1451 gaggcacaga gaatccatca acccacttat acaagaaaca atggagagaa
1501 tgaattcctt aggaatcata gactgtttat ggaaactcct cttggctcat
1551 ggtcgcaaat ggttagtctc atcggagccg aattgtctgc atcagtcaag
1601 caacatgtaa aacagaagag ctttattgta aaaagactgc taggatcagg
1651 aatatacttg ctgattaagc caactaattc caaaagtcac atatttgtgt
1701 catatgctct tgacaagcta tactggtctc atgacttgtc aagtgggact
1751 gaatttaaaa ggtatttgga cagcggagac ttatttatca ctgagttcac
1801 gtcctacaag ctgagcaaat taactaactt atgtaagtgc tgttcgctat
1851 tggaaagttc tctcagcttc tggacagaag catatcatga gaagccatgg
1901 ctaagtgttg atgtgatcag ggatggacgt cagccagaga tcttgacaat
1951 gacaaagctt tcgttattga ccttgctaga ggataaagct agaactgaag
2001 aattgcaaac acttcttaga tatgtagtta tggaaggatt tgtatcgcaa
2051 cctgagctac ctagaccaca gaagatgata tctaaattgc ctagagtttt
2101 aagaacagag ttgcaagtct tgcttgtcca gagggtgatg acttctataa
2151 gtaggattgc agcaaatcca ttcaagctca agaagtctga tggctccatt
2201 agctggtctg gattgttcaa tccgttgtct ggctctaaat tgcttgactt
2251 acagccgctg ataagctgct gctacaacgg gtatttcaag aacaaagaag
2301 aggaaactga gccttctgct ttgtcagcta tgtacaagaa gataattgaa
2351 ctagagcatt taaagccagg aacagatgaa ttcttaggtt ggggggaccc
2401 cgaagacccc aagactcatg aattcagcag atcctacctc aaagaagtgt
2451 gtgagcacgg aaaagcaatc ttgaaaagaa tgtacggaca caatgttctg
2501 caacaaattg atgaccagat cacaagagaa atctcctcac tcaccattga
2551 aagactagca actctgaagg caactagtaa ctttgatgaa aactggtatg
2601 tgtataagga ttgcaaggat aaaaactaca caagagacaa attactggtc
2651 aaaatgtctc agtttgcatc agaagggaaa acattagcaa tagaaaagtt
2701 cgaagactgt atgacctcta ttgaatcaag aggggctatg catatttgtt
2751 tgtttaagaa gcagcagcat ggaggactta gggagattta cgtcatggga
2801 gcagaagaga gaattgttca gtcagtcgta gagtgcatag ctaaaacggt
2851 tggcaaattc ttctcttcag atacgctatg taatccaaac aataagtcca
2901 gaattcctga aagtcacgca catagggcta gaaaacactg caggtcttca
2951 gtttggacgt gtgcaacttc cgatgatgcc aagaagtgga atcagggtca
3001 ctttgtaaca aagtttgcta tgatgctgtg tgagttcaca tcaccgaaat
3051 ggtggcccat aatcattaga gggtgctcaa tgttcacccg gaaatttatg
3101 atgatgaata tgaggtatct ggacattcta aatggacaca gagagctcaa
3151 agtagatgat gaatttgtga tgaccttgtt caatgcatat catggagagg
3201 tggaggtgcc atggcttgag aagggaagga cgtacttaca gacaaccaca
3251 gggatgatgc agggaattct tcatagtacc tcatctttgc ttcacactct
3301 acatcaggaa tttgttcgct cattgtcatt caaagttttt aacatgaaag
3351 ttcagccaga catgggttct aaggtggttt gtgatgtcat gcagggctct
3401 gatgacagct ctatgattat aagttttcct gcgaatgaag attccacctt
3451 tatgaagtgt aaaatggcag cagcaatgtg ttttagagtg aagaaaacac
3501 tagggctata cttgggaata tacccgtccg aaaagtccac gtctaacaca
3551 gactttgtga tggaatataa ttctgagttc ttcttccaca ccagccatgt
3601 gagacctttg gtgaggtggg tctcatcatg ttgtagtcta ccagaggtag
3651 aaactcttgt tgccaggcaa gaagaggcat ccaatctact cacctcaata
3701 tcagaggggg gaggatcttt tgcattgtct gctatgatac aacaatctca
3751 gtgcacaatt cactatcagt taatagggat gggtgtgtca tccattttcc
3801 ctcactacag aagggctcta gctagatgga aagaccctgg gctggggttc
3851 tttctgctag acaatccata tgctgcagga ttagggggtt ttagatttaa
3901 tctgttcaag gcaatcacaa tgacagaatt acagaaggtc tatgcttatt
3951 tcatgagaaa agtcaaggac aattctctac ctgaggagga gggagtgtta
4001 gtgccagaga cctgcagtgt cagtcctggt ggagcaataa taatgagttc
4051 ctcgttgaaa tggggatcca gaaagaagtt ctctaggctc agagacagac
4101 tgaatatacc agaaaactgg gttgagttaa ttaatgacaa cccagaggtc
4151 ttatacagag ctccaagaac aggagaagag ataatattaa gaatagctga
4201 gaaagtacac agtcctgggg ttgtctcttc attatcaact gggaatgcag
4251 tctgtaaagt aatggcaagc tcagtatact tcctttctgc ggcaattttt
4301 gaggatagtg gcaggccaga attctcctac ttagacaatt caaagtatag
4351 tatactacaa aaaatgatgg cgtatgaagg cttcaatggc tcacatgata
4401 tagatcctga agacatactc tttcttttcc caaatgtgga agagctggaa
4451 caattagata tgataattta tgataagggc cccattgatt tggtagagag
4501 agttagttct agggaagcaa cccagtcaag agtagtagtt tttgatgaga
4551 agagatgcat gagagtcagc ccagagaaat tggtttccga taaatggttt
4601 ggaactcaaa agagcaagat aggcagaact gcatttgagg ttgaatgggc
4651 aaagttgacc cgagtaataa ggtggctcaa ggacactcct gagggaacaa
4701 tggaaaagtc tccattgtca aatcagatcc aaataaggaa tttctttgcg
4751 agactggagg gcagatccag atgtgtgagg ataacaggag ctccagtgaa
4801 gaaaaggtca ggcatgagta agctagccct ggtaatacgt gataacttct
4851 gtaaaactgg tcacttgaga ggaatagaag acataagtgg gagctctaga
4901 tctgtttctg tggaggtctt gaggcacatt ctgttctcgg ttctgcaggg
4951 tccttatagt gacgagtcaa agctggatct aagtataaaa tcattatctt
5001 catctagcga gattgagctg agagaaaatg atgggaagac taaggctaac
5051 attttaagca tactgcagag ctacatatgg gccgacagag gagtgatcca
5101 gaagatagaa agggcaggag caggaacagt agggggtttc atcaagcctc
5151 aaaagtcata caaagatggt cagacaatta aatactatgg acatggaata
5201 tggcgtggta tgatggacgg tatagacatg cagattgata tagacaacaa
5251 gaggaatcag aatccgcaga tcacaagtat aagagttgct ggtacaaaaa
5301 gcccatgggt tgtttgccag agtttaaaaa tatggtgtga agacatgggg
5351 gttaaaaatt cagctgactt ctctgagtcg gtcagacgga ctcccaaatt
5401 ctggctgtca aacttcagaa tgttcggcgg gaaccatcct ttgggagccc
5451 ctgtttacat cttagatggc agaatggatg acctacgaga gatcagagat
5501 gaggacattc tcatcaaagt caggagagga acattgaatt tgtttgtaaa
5551 aagcaggggg ggtagtgaaa tgcacatatt atcatatact tcttctgaca
5601 ctgatctgag tccatcaatg gttaaagagg ctgaattatc tatgccaggg
5651 ctgatgaatc tttttagcag agaaccaagt agatcctggg tgagttgctc
5701 tcccctgccg gtccaatata cagaagtgct gttggacgtg tgtgaaggat
5751 tgaaaagagt ggacagaata aaccccatta ggctaagtga aataattaga
5801 atctgcacag actcttcttt gagaacaaag gttggcacag tgtactcaat
5851 gcagcagttc tcagaagagg cccaaataat tgattgtgat gacctcctag
5901 acattatgat agaggacatc aaaactggag ccttcagtga ggttgttagg
5951 aagatggagg atgaggtgaa aggagataat gaggacttgg attttgacta
6001 tgatgacatc aatttgttcg gccctgctca ccacaaagag tatggggaat
6051 tatccttagt gtcacatcct ttgatggaca aatttgtaga caatgccata
6101 tccataatgg gtaggtcatc actcaggaga ctgctggagc tgggggtgac
6151 aaaaacaaga tatctgaaga tctcgagatt ggtctacaga gctataggga
6201 ggaatgtgga tgcaattaaa acagatgact ttagcttgga agaccagcct
6251 agtataagtg aagacatgct gggatgaaag accccagatc tcatgctagg
6301 aacaaatgga ttgatcagag cattacatac tgtttggaga ttagaatttg
6351 gtggaatatt ataaattcat taagtaatgg gcggtctttg tgt