Sequence of DPV Arumowot virus

Arumowot virus segment S, complete sequence.

ACC No: HM566145

Dated: 2012-05-18 | Length: 1798 | CRC: -1688229138

                
ID   HM566145; SV 1; linear; genomic RNA; STD; VRL; 1798 BP.
XX
AC   HM566145;
XX
DT   18-MAY-2012 (Rel. 112, Created)
DT   18-MAY-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Arumowot virus segment S, complete sequence.
XX
KW   .
XX
OS   Arumowot virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus;
OC   unclassified Phlebovirus.
XX
RN   [1]
RP   1-1798
RA   Palacios G., Savji N., Sze W., Hutchinson S., Tesh R.,
RA   Travassos da Rosa A., Lipkin W.;
RT   "Genetic diversity of the Phlebovirus genus";
RL   Unpublished.
XX
RN   [2]
RP   1-1798
RA   Palacios G., Savji N., Sze W., Hutchinson S., Tesh R.,
RA   Travassos da Rosa A., Lipkin W.;
RT   ;
RL   Submitted (19-JUN-2010) to the INSDC.
RL   Center for Infection and Immunity, Columbia University, 722 West 168th
RL   Street, New York City, NY 10032, USA
XX
CC   GenBank Accession Numbers HM566143-HM566145 represent the complete
CC   genome of Arumowot virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1798
FT                   /organism="Arumowot virus"
FT                   /segment="S"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /db_xref="taxon:904698"
FT   CDS             46. .849
FT                   /codon_start=1
FT                   /product="nonstructural protein"
FT                   /protein_id="AEF30502.1"
FT                   /translation="MASPYNYIHDLVTPNYNGPIPGEVVVSFEPVNSYVNNPVCVYEDL
FT                   EFEISGMGLCTMTSESLYDFLDSGLMPWRWGKGMFESRLTAMETPLFDSFLKQIPMIPT
FT                   TQLFSVGRDPLRAALSWPTGRCSLRFFRQQWGSDAMSYQSNRKLRARLLFQSTQSSDLE
FT                   TAIITLAKDIRGMSSILDFPLNLIPGFDLLKCVSILQFIRALRSYPETEAERQSNGLRD
FT                   DLDIFLGSAREALSRDFPALIPAITPESDDSLWDSGSSCEDDVDV"
FT   CDS             complement(1036. .1770)
FT                   /codon_start=1
FT                   /product="nucleocapsid"
FT                   /protein_id="AEF30503.1"
FT                   /translation="MDNYAKIAIDFAGDAIDASELIALAEEFSFNGFDPNAIMKLIIER
FT                   GGNNWKEDAKMMIVIGITRGNKIKKMMDRMGEEGKTKLKYLVDKYKLKEASPGARDLTL
FT                   SRVAAVLAPWTVQALRVLENKLPVTGATMDSLSHNYPRALMHSAAGGILDPGLGDACFG
FT                   ALLQAHSLYLDTFSRLINPPLRSKSKQEVAQSFSSALQAAYSSNFFSPAQKRQILQTMG
FT                   LIDMNLQPTKAVLDAAGIYNSM"
XX
SQ   Sequence 1798 BP; 475 A; 414 C; 377 G; 532 T; 0 other;

hm566145 Length: 1798  18-MAY-2012  Type: N  Check: 6756  ..

       1  acacaaagac cccctgagga aatactaaat cagaaagttt taaatatggc
      51  ttctccatat aattacattc atgatttagt gaccccaaac tacaatggac
     101  caatacctgg agaggttgtt gtttcatttg agcctgttaa ctcatatgtg
     151  aacaatcctg tctgtgtata tgaggacctt gagtttgaga tatcaggcat
     201  gggtctgtgc actatgacct ctgaatcact ttatgacttt ttggactcag
     251  gattgatgcc ctggagatgg ggcaaaggca tgtttgaatc aaggctaact
     301  gcaatggaga ctcctttgtt tgattctttc ttgaagcaga ttccaatgat
     351  tccaaccacc cagctcttct ctgttggaag agacccttta agagcagcac
     401  tgtcttggcc aacaggcaga tgctcactga gattcttcag acagcaatgg
     451  ggctcagacg ctatgtctta ccaatccaat agaaaactga gagctagatt
     501  gctgttccag tctactcagt catctgactt ggaaactgca attataactc
     551  tagctaaaga cataagaggc atgtcttcca ttcttgattt tcctctaaat
     601  ctgattcctg gatttgatct actgaaatgt gtgtccattt tgcagtttat
     651  aagggctctg agaagctatc cagagacaga agctgagaga cagtccaatg
     701  gcctcaggga tgatctggat atattccttg gttctgctcg agaagcactc
     751  tctagagact tccctgcttt gataccagct attacccctg aaagtgatga
     801  ctctctttgg gactctgggt cctcttgtga ggatgatgtt gatgtgtaag
     851  attgccactg ccccacccct cctcccgccc taatttaata cttacaatat
     901  gattatgaaa cttatcctaa atgattagta aacttaaaat caaacttatc
     951  ttaatcctaa aaccccaaac ccaaaccctc ccttaaccct aaccctcacc
    1001  ccaccccaag ggcagcaatg atgttgacat tgctctcaca tggagttgta
    1051  gatacctgca gcatcaagaa ctgccttagt aggctgaaga ttcatgtcaa
    1101  tcaagcccat tgtttgcaaa atctgcctct tctgtgctgg agagaaaaag
    1151  ttgctagagt atgcagcttg gagagcagaa gagaaagact gagccacctc
    1201  ttgcttgctc tttgatctca gaggaggatt tattaatctt gagaaggtgt
    1251  caagatagag gctgtgtgcc tggaggagag ctccaaagca agcatcacct
    1301  agacctgggt ctaggattcc tcctgcagca gagtgcatca gggcgcgtgg
    1351  atagttgtga gacagtgaat ccatggtggc accagtgact gggagcttgt
    1401  tttcaagaac tctgagtgcc tgaactgtcc agggggctag aactgcagcc
    1451  actcttgaga gtgtcagatc tcgcgctcct gggctggctt ctttgagctt
    1501  gtatttatca acaaggtact tgagctttgt ctttccctct tctcccatac
    1551  ggtccatcat ttttttaatt ttgttgccac gagtgatacc aatgacaatc
    1601  atcattttgg catcttcctt ccagttgttg cctcctctct caataatcag
    1651  cttcataatt gcatttggat caaatccatt gaagctgaac tcctcagcta
    1701  gagctatcag ctcagatgca tcaattgcat ctccagcaaa gtcaatagca
    1751  atcttggcgt agttatccat tttttaactc tttcaggggt ctttgtgt