Sequence of DPV Durania virus

Durania virus strain Co Ar 171162 segment S, complete sequence.

ACC No: HM566156

Dated: 2011-05-27 | Length: 1834 | CRC: -1201591356

                
ID   HM566156; SV 1; linear; genomic RNA; STD; VRL; 1834 BP.
XX
AC   HM566156;
XX
DT   20-APR-2011 (Rel. 108, Created)
DT   27-MAY-2011 (Rel. 109, Last updated, Version 2)
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DE   Durania virus strain Co Ar 171162 segment S, complete sequence.
XX
KW   .
XX
OS   Durania virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus;
OC   unclassified Phlebovirus.
XX
RN   [1]
RP   1-1834
RX   PUBMED; 21325481.
RA   Palacios G., Travassos da Rosa A., Savji N., Sze W., Wick I., Guzman H.,
RA   Hutchison S., Tesh R., Lipkin W.I.;
RT   "Aguacate virus, a new antigenic complex of the genus Phlebovirus (family
RT   Bunyaviridae)";
RL   J. Gen. Virol. 92(PT 6):1445-1453(2011).
XX
RN   [2]
RP   1-1834
RA   Palacios G., Savji N., Sze W., Hutchinson S., Tesh R.,
RA   Travassos da Rosa A., Lipkin W.;
RT   ;
RL   Submitted (19-JUN-2010) to the INSDC.
RL   Center for Infection and Immunity, Columbia University, 722 West 168th
RL   Street, 17th Floor, New York, NY 10032, USA
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CC   GenBank Accession Numbers HM566155-HM566157 represent the complete
CC   genome of Durania virus strain Co Ar 171162.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1834
FT                   /organism="Durania virus"
FT                   /segment="S"
FT                   /host="Lutzomyia sp."
FT                   /strain="Co Ar 171162"
FT                   /mol_type="genomic RNA"
FT                   /note="serogroup: Aguacate"
FT                   /db_xref="taxon:1006585"
FT   gene            37. .867
FT                   /gene="NS"
FT   CDS             37. .867
FT                   /codon_start=1
FT                   /gene="NS"
FT                   /product="nonstructural protein"
FT                   /protein_id="AEB70978.1"
FT                   /translation="MTSYLFDTPVIVRPNGYFDREVYVTYMAHNKYCEHTVSVHNCMEI
FT                   PVRNFGVSMLHKESFSDFYILGLFPFRWGDKMGNSRVTRESFPFMKELLADICKMHDSE
FT                   FFRSFLPNIKKALSWPLGYPSLDFIRMTDPDNSMPHFREISNNATLIMQMGQPAIDLDQ
FT                   GFVNAHKRIVMESITRGFGHKDFPGKNLIFEVASLQCVRMLNAVPADLLYCQITNSLTS
FT                   TLMKHRAEMESHPQGPLGNQKWIPDPDSWLLDDQSSTLHEEFNLIISDSEDEDE"
FT   gene            complement(1045. .1782)
FT                   /gene="NP"
FT   CDS             complement(1045. .1782)
FT                   /codon_start=1
FT                   /gene="NP"
FT                   /product="nucleocapsid"
FT                   /protein_id="AEB70977.1"
FT                   /translation="MADFERLAIEFSEAGVNIADVVAWVNEFAYQGFDAKRVIELLQQR
FT                   GGTSWQEDARKMIVLALTRGNKIEKMIMKMSEEGKKTVLSLKKRYQLKSGNPGRDDLTL
FT                   SRVAAALAGWTCQALPHVENFLPVTGEAMDALSPSFPRCMMHPSFAGLVDTTLPPETQD
FT                   AILAAHSLFLVQFSKVINPGLRGKAKSEVVASFKQPMLAAVNGGFIGPEKRRKMLQSLG
FT                   VVDVNGIPSEAVKVAAQKFRASQ"
XX
SQ   Sequence 1834 BP; 487 A; 472 C; 371 G; 504 T; 0 other;

hm566156 Length: 1834  27-MAY-2011  Type: N  Check: 5646  ..

       1  acacaaagac cccccgtgat ttctcaaaca tcaaacatga ctagctacct
      51  tttcgacacg cctgttatag ttagacccaa cgggtacttt gacagagaag
     101  tctatgtcac atatatggct cacaacaaat actgtgagca cacggtgtct
     151  gtccataact gcatggagat acctgttagg aactttggag tctcaatgct
     201  gcataaagag tcgttttcag acttttacat tctggggctc tttcccttca
     251  gatggggaga caagatgggg aactcaagag taacaagaga gagtttccct
     301  tttatgaaag aactcctggc tgacatatgt aaaatgcatg actctgaatt
     351  ctttcgatct ttcttaccca acatcaagaa agcgttgtcg tggcctctcg
     401  ggtatccttc tcttgatttt atcagaatga cagaccctga caatagtatg
     451  cctcacttca gagagatttc taacaatgca actctcatta tgcaaatggg
     501  acagcctgct attgatcttg atcaaggttt tgttaatgcc cataagagga
     551  ttgttatgga atctataact agagggtttg gtcataagga tttccctggg
     601  aagaacctta tatttgaagt tgcatcactg cagtgtgtga gaatgttaaa
     651  tgctgttcct gctgacttgt tgtattgcca gatcaccaat tctctcactt
     701  cgactctaat gaagcatcgt gctgagatgg agagtcatcc tcagggccct
     751  ctaggcaacc agaagtggat acctgatcct gattcttggt tgctggatga
     801  ccagtcatcc actctccatg aagagttcaa cctcataatc tctgattcag
     851  aagatgagga tgagtagagg cgctgccaaa atcccaccca ccctcattcc
     901  ctgtaaaaaa ccctatacta tgtacataga ccccaaagac ccacctgtat
     951  atatagatcc catccccaaa acccacccac caaagcccac ccagaagccc
    1001  accccttgac cccacttacc caaacccaac cacaacctgg cagcttattg
    1051  agaagctctg aacttctgag ctgccacctt gactgcctct gaaggaatgc
    1101  cattgacatc cacaactcca agagactgga gcatcttcct cctcttctct
    1151  ggaccaatga agcccccatt gactgctgct agcatgggtt gcttaaagga
    1201  ggctacgacc tcactttttg ctttccccct gagccctggg ttaatcactt
    1251  ttgagaattg gactaagaac aagctgtgtg ctgcaaggat ggcatcctga
    1301  gtctctggtg gcaaagttgt gtcaacgagc ccggcaaaac tagggtgcat
    1351  catacagcga gggaagctag gagataaagc atccattgcc tcacctgtta
    1401  caggaagaaa gttttcaaca tgcggaagag cctggcaggt ccatcctgct
    1451  agagcagcag cgactcttga caaggtcaag tcgtctctgc cagggtttcc
    1501  agacttgagc tggtacctct tcttgagaga tagcacagtc ttcttccctt
    1551  cttcagacat cttcataatc atcttttcaa tcttgttccc tctggtgaga
    1601  gcgagtacaa tcatcttcct agcatcctct tgccatgagg ttcctcctct
    1651  ctgctggagt agctcaataa ctctctttgc gtcaaagccc tgataggcga
    1701  actcattcac ccatgcaacc acatccgcaa tattaacgcc ggcttcgctg
    1751  aactctattg ctagtctttc aaagtcagcc atttcttgaa ttccttcaat
    1801  taatagttaa gtagtatttc ggggttcttt gtgt