Sequence of DPV Bujaru virus

Munguba virus segment S, complete sequence.

ACC No: HM566166

Dated: 2012-05-03 | Length: 1806 | CRC: 1820089566

                
ID   HM566166; SV 1; linear; genomic RNA; STD; VRL; 1806 BP.
XX
AC   HM566166;
XX
DT   03-MAY-2012 (Rel. 112, Created)
DT   03-MAY-2012 (Rel. 112, Last updated, Version 1)
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DE   Munguba virus segment S, complete sequence.
XX
KW   .
XX
OS   Munguba virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus.
XX
RN   [1]
RP   1-1806
RA   Palacios G., Savji N., Sze W., Hutchinson S., Tesh R.,
RA   Travassos da Rosa A., Lipkin W.;
RT   "Genetic diversity of the Phlebovirus genus";
RL   Unpublished.
XX
RN   [2]
RP   1-1806
RA   Palacios G., Savji N., Sze W., Hutchinson S., Tesh R.,
RA   Travassos da Rosa A., Lipkin W.;
RT   ;
RL   Submitted (19-JUN-2010) to the INSDC.
RL   Center for Infection and Immunity, Columbia University, 722 West 168th
RL   Street, New York City, NY 10032, USA
XX
CC   GenBank Accession Numbers HM566164-HM566166 represent the complete
CC   genome of Munguba virus.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1806
FT                   /organism="Munguba virus"
FT                   /segment="S"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:1048854"
FT   CDS             28. .768
FT                   /codon_start=1
FT                   /product="nucleocapsid"
FT                   /protein_id="AEL29659.1"
FT                   /translation="MSADYQRIAIEFGSEPIDRDAITLWVNEFAYQGFDASNVLRLLQQ
FT                   RGGATWKEDAKKMIILVLTRGNKPENMVKRMSEAGKRTVEALVVKYQLKSGNPGRDDLT
FT                   LARVAAALAPWTCQAAFVVSEFMPVTGRAMDDHAASYPRGMMHTSFAGLIDPTLPQSTY
FT                   SDLVAAHSLFLYYFSKTINVGLRGKTKAEVEASFSQPMQAAINSGFISGSQRRQFLQNL
FT                   GIIDRNSVAVPAVATAAAAYRALS"
FT   CDS             complement(951. .1760)
FT                   /codon_start=1
FT                   /product="nonstructural protein"
FT                   /protein_id="AEL29660.1"
FT                   /translation="MSFLWNLPVVRPSSCFLGLPSVNYVAFNKMATFEACKVNGAEIPL
FT                   KHLKLCYDKRPTLFDFLRNREVPVSWGDHTDDQILNRSPRTFEGLMFGLSEIEEVEYGR
FT                   YNEPYLKKAVSWPLSYPSHTFFNLAVRKTEMGNWLHSSMWATMMLRMSHTDNLEESIIK
FT                   VRKRIIEKANDMGLDLSLFTGENLILEIAHLQCLRLIYASRKERERGVNHSKTYSIVRS
FT                   YDCFSVISDVNFDPMIADSLFGSNDGTMSGESDVDQLRVDLERYLSL"
XX
SQ   Sequence 1806 BP; 511 A; 380 C; 431 G; 484 T; 0 other;

hm566166 Length: 1806  03-MAY-2012  Type: N  Check: 7420  ..

       1  acacaaagta cccctaatac gttaacaatg tctgctgatt accagaggat
      51  tgctattgag ttcggttctg aaccgatcga cagagatgca ataactctgt
     101  gggtgaatga attcgcctat cagggatttg atgcatccaa tgttctgcga
     151  cttctgcagc agagaggagg tgccacatgg aaagaagatg ctaaaaaaat
     201  gatcatcctg gttcttacaa gaggaaataa gcctgaaaac atggtaaaaa
     251  gaatgtctga ggctggaaag agaacagttg aggctcttgt tgtcaagtat
     301  cagctgaagt caggaaatcc tggcagagac gacctaacac tagcccgggt
     351  agctgctgcc ttagccccat ggacatgcca ggctgccttt gttgtgagtg
     401  agttcatgcc tgtgacagga agagcaatgg atgaccatgc agcttcctac
     451  ccacggggga tgatgcacac tagctttgct ggattgattg atcccacatt
     501  gcctcaatcc acatattctg atctagtggc tgctcacagc ctgtttttgt
     551  actatttctc aaagaccata aatgtgggat taagaggaaa aacaaaagca
     601  gaagttgaag cctccttcag ccagcctatg caggctgcaa taaatagtgg
     651  tttcataagc gggagccaga ggagacagtt tctgcagaac ctcggcatta
     701  ttgacagaaa ctcagtggcg gtgcctgctg ttgcaacagc agctgctgcg
     751  tatagagctc tgtcttaata ccgacatgct gcccagaaag gggagggtag
     801  ggaaaggggg gttgtgacaa tggggtgaat ggggttgaat cacatgttga
     851  ttctaatggg attatgatct tgggaggggt tgattgggtt ggggggcttg
     901  gggacaggga tctgagggga ggggggtcgg gcagctgcaa ccagtgcttc
     951  tcatagtgat agatatcttt ctaagtctac tctcagttgg tcaacatcag
    1001  actcaccaga cattgtgcca tcattagatc caaaaaggga atcagctatc
    1051  atgggatcaa aattgacatc tgagataaca gagaagcaat cataagatct
    1101  cacaattgaa taagtttttg aatgattcac tcctctctct ctttcttttc
    1151  ttgaagcata tatcaacctg aggcactgca aatgtgcaat ctcaaggatg
    1201  agattttccc ctgtaaagag agagagatcc agtcccatat cattggcctt
    1251  ttctattatc ctttttctga ctttaatgat agactcctcg agattgtcag
    1301  tgtgagacat tctcagcatc atagttgccc acatgctaga atgcagccag
    1351  ttccccattt ctgtttttcg aacagcaaga ttaaagaaag tatgggatgg
    1401  ataactaaga ggccaagaga cagctttctt taaataaggc tcattatacc
    1451  tcccatactc cacctcttca atctcagaca agccaaacat aagtccctca
    1501  aaagttcttg gacttctatt gagtatttga tcatctgtat gatctcccca
    1551  agatactggc acctccctgt tcctcaagaa atcaaaaagt gttggtctct
    1601  tatcatagca tagcttcaag tgcttcaaag ggatctcagc accattcact
    1651  ttgcatgctt caaaagtggc catcttgttg aatgccacat agttaactga
    1701  cgggagcccc aggaagcagg agcttggtct cactactggg agattccaaa
    1751  ggaaactcat tatgtgtagt attgtcactt atcacgcaga aggggggtct
    1801  ttgtgt