Sequence of DPV Southern rice black-streaked dwarf virus
Rice black-streaked dwarf virus 2 isolate Hai Duong segment S10 P10 protein gene, complete cds.
ACC No: HM583674
Dated: 2012-08-28 | Length: 1674 | CRC: 1872575946
ID HM583674; SV 1; linear; genomic RNA; STD; VRL; 1674 BP.
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AC HM583674;
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DT 16-MAY-2011 (Rel. 108, Created)
DT 28-AUG-2012 (Rel. 113, Last updated, Version 2)
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DE Rice black-streaked dwarf virus 2 isolate Hai Duong segment S10 P10 protein
DE gene, complete cds.
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KW .
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OS Rice black-streaked dwarf virus 2
OC Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Fijivirus;
OC unclassified Fijivirus.
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RN [1]
RP 1-1674
RA Hoang A.T., Zhang H.M., Yang J., Chen J.P., Hebrard E., Zhou G.-H.,
RA Vinh V.N., Cheng J.A.;
RT "Identification, characterization, and distribution of Southern rice
RT black-streaked dwarf virus in Vietnam";
RL Plant Dis. 95(9):1063-1069(2011).
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RN [2]
RP 1-1674
RA Zhang H.M., Yang J., Chen J.P.;
RT ;
RL Submitted (21-JUN-2010) to the INSDC.
RL Institute of Virology and Biotechnology, Zhejiang Academy of Agricultural
RL Sciences, 198# Shiqiao Road, Hangzhou City, Zhejiang Province 310021, P.R.
RL China
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FH Key Location/Qualifiers
FH
FT source 1. .1674
FT /organism="Rice black-streaked dwarf virus 2"
FT /segment="S10"
FT /isolate="Hai Duong"
FT /mol_type="genomic RNA"
FT /country="Viet Nam"
FT /db_xref="taxon:566568"
FT CDS 1. .1674
FT /codon_start=1
FT /product="P10 protein"
FT /db_xref="InterPro:IPR008618"
FT /db_xref="UniProtKB/TrEMBL:F6K9Z4"
FT /protein_id="AEE81777.1"
FT /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNSLFHE
FT SNIVKSPHIASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKEHIQSYFRNEHQ
FT PIFQTLTNNNLSDEFLGVTTFGLSLFATSKLDAEQIERVQIETLTEGNVTLKPFSADGL
FT EVILDDSYIGIIGKISGLEVHKLLDKCCREVPAQMGILTDEVKLLIRSGKLRIDGGYDF
FT NCPASTTDVTRYGGYDQYSRQMFEKLNLFFNISLSIIPVSALKTIHVFEKELSALDADK
FT SLLEQTWSGVSSFIETWKVKTKAKDEDQDEYELTGLSALRKGVDGNSVSSPYNDKKFIE
FT WYSKTFAKIEKSSSLRKTEIEDKNTSGTSNITKQVKIHFPVQYFDEVKSNGHEKSVTVI
FT TNKGEMSLESYRKIGEILSAIWKRGKALAAPCIDYIKLGVEKAYHLAPVIMKKYNLTID
FT DIIHFIEIGPSYLAKLDKIDDWSLIAKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT NNLLKADRDRLIKKATTANSSTSNSNSEHGQKVVLNKVTR"
XX
SQ Sequence 1674 BP; 589 A; 296 C; 285 G; 504 T; 0 other;
hm583674 Length: 1674 28-AUG-2012 Type: N Check: 5527 ..
1 atggctgaca taagacttga catagcgccc gatcttatcc ataatggtgt
51 gcctcaaaga ctttcagata cgataattct aaacaaccga ccaacaatca
101 cacttctgtc tcacttcaac tctctttttc acgaatcaaa tattgttaaa
151 tcaccccaca tcgcgtcatc tcaaactaca gttaatttat acattcgtaa
201 gcatttacta actcgacttc atgatagatt acaaactgtc gaaaccagta
251 ctctaccgaa cattactcaa cttaaagaac atattcaaag ttatttccgt
301 aatgaacatc aacctatttt tcaaaccctg actaacaata atcttagtga
351 tgaattttta ggtgtaacta cttttggttt aagtttattc gcaacttcga
401 agttggatgc agaacaaata gaacgagtac aaattgagac cctaactgaa
451 ggaaacgtta cacttaaacc attctccgct gacggtttag aagtaatttt
501 agatgatagt tacatcggaa taattggaaa aatttctggt ttagaagtac
551 ataaattgct cgataaatgt tgtcgtgaag ttcctgctca aatgggaata
601 ttaactgacg aagttaaact tttaatacgt tccggaaaat taagaattga
651 cggtggatac gatttcaatt gtcctgctag tacaacagac gtgacacgct
701 atggcggtta cgaccaatat tcgagacaaa tgtttgaaaa attgaatttg
751 ttctttaaca tcagtttgag cattattcct gtttctgcac ttaaaactat
801 tcatgtattt gagaaagaac taagcgcttt agatgctgac aaatcacttt
851 tagaacaaac atggagcgga gtctcctcat ttattgaaac ctggaaagta
901 aaaactaaag ctaaagatga agatcaagat gagtatgaac taactggact
951 gtctgcactt agaaaaggag tcgatggcaa ttctgtatct agcccttaca
1001 atgataagaa attcatcgaa tggtattcta agacgtttgc taaaatagag
1051 aaaagttcat cgttgcgtaa gaccgaaatt gaagacaaaa atacatccgg
1101 cacctcaaac ataacaaagc aagttaaaat tcattttcct gttcagtatt
1151 tcgatgaagt caaatctaac ggtcatgaaa aaagtgttac tgtaatcact
1201 aataaaggtg aaatgtcatt ggaatcttac cgaaagatag gtgaaatatt
1251 aagtgcaatc tggaaacgtg gtaaggcatt agctgctccc tgcatcgatt
1301 acatcaaact tggcgtcgaa aaagcttatc atttagctcc tgtaatcatg
1351 aagaaatata atttaactat tgatgatata attcatttta ttgaaattgg
1401 tccttcatat ttagcgaaat tggataaaat tgatgattgg tccttaattg
1451 caaaattgat tattaccagt gttttgccaa acatcattca agcggtgtat
1501 aaaacagatc ctagcaataa tgttatgaat tcagttatta ttagcagagc
1551 caacaattta ttgaaggcgg atcgcgatcg tctaattaag aaagctacca
1601 ctgcaaattc atctaccagt aattcgaatt cagaacatgg tcaaaaggtt
1651 gtgttaaata aagtcaccag atga