Sequence of DPV Tomato spotted wilt virus

Tomato spotted wilt virus isolate YN-1 nucleocapsid protein (N) gene, complete cds.

ACC No: HM594685

Dated: 2010-11-07 | Length: 777 | CRC: 244860129

                
ID   HM594685; SV 1; linear; genomic RNA; STD; VRL; 777 BP.
XX
AC   HM594685;
XX
DT   07-NOV-2010 (Rel. 106, Created)
DT   07-NOV-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Tomato spotted wilt virus isolate YN-1 nucleocapsid protein (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Tomato spotted wilt virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RP   1-777
RA   Tang Q., Sun S., Zhang D.;
RT   "Cloning and sequence analysis of the nucleoprotein genes of Tomato spotted
RT   wilt virus";
RL   Unpublished.
XX
RN   [2]
RP   1-777
RA   Sun S., Tang Q., Zhang D.;
RT   ;
RL   Submitted (28-JUN-2010) to the EMBL/GenBank/DDBJ databases.
RL   Institute of Plant Protection, Hunan Academy of Agricultural Science,
RL   Mapoling, Changsha, Hunan 410125, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .777
FT                   /organism="Tomato spotted wilt virus"
FT                   /host="tomato"
FT                   /lab_host="Petunia hybrida"
FT                   /isolate="YN-1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="30-Jul-2009"
FT                   /db_xref="taxon:11613"
FT   gene            1. .777
FT                   /gene="N"
FT   CDS             1. .777
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="ADP22301.1"
FT                   /translation="MFKVKLTKENIVALLTQSKDLEFEEDQNLVAFNFKTFCLENLDQI
FT                   KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLTELA"
XX
SQ   Sequence 777 BP; 263 A; 129 C; 168 G; 217 T; 0 other;

hm594685 Length: 777  07-NOV-2010  Type: N  Check: 8867  ..

       1  atgtttaagg ttaagctcac taaggaaaac attgttgctt tgttgacaca
      51  aagcaaagat cttgaatttg aggaagatca gaatctggta gcattcaact
     101  tcaagacttt ttgtctggaa aaccttgacc agatcaagaa gatgagcatt
     151  atttcatgtc tgacattcct gaagaatcgt cagagtataa tgaaggttat
     201  taagcaaagt gattttactt ttggtaaaat taccataaag aaaacttcag
     251  acaggattgg agccactgat atgaccttca gaaggcttga tagcttgatc
     301  agggtcaggc ttgtcgagga aactgggaat tctgagaatc tcaatactat
     351  caaatctaag atagcttctc accctttgat tcaagcctat ggattacctc
     401  ttgatgatgc aaagtctgtg aggcttgcca taatgctggg aggtagctta
     451  cctcttattg cttcagttga tagctttgag atgatcagtg ttgtcttggc
     501  tatatatcag gatgcaaaat acaaagacct agggatcgat ccaaaaaagt
     551  atgacaccag ggaagcccta ggaaaagttt gcactgtgct aaaaagcaaa
     601  gcatttgaaa tgaatgaaga tcaggtgaag aaagggaaag agtatgctgc
     651  tatacttagc tccagcaatc ctaatgctaa aggaagtatt gctatggaac
     701  attacagtga aactcttaac aagttctatg aaatgttcgg ggttaaaaaa
     751  caggcaaaac tcacagaact tgcttaa