Sequence of DPV Salobo virus
Salobo virus segment M glycoprotein gene, complete cds.
ACC No: HM627183
Dated: 2012-05-03 | Length: 4400 | CRC: -440369114
ID HM627183; SV 1; linear; viral cRNA; STD; VRL; 4400 BP.
XX
AC HM627183;
XX
DT 03-MAY-2012 (Rel. 112, Created)
DT 03-MAY-2012 (Rel. 112, Last updated, Version 1)
XX
DE Salobo virus segment M glycoprotein gene, complete cds.
XX
KW .
XX
OS Salobo virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus;
OC unclassified Phlebovirus.
XX
RN [1]
RP 1-4400
RA Palacios G., Savji N., Sze W., Tesh R., Lipkin W.;
RT "Genetic diversity of Phleboviruses";
RL Unpublished.
XX
RN [2]
RP 1-4400
RA Palacios G., Savji N., Sze W., Tesh R., Lipkin W.;
RT ;
RL Submitted (03-JUL-2010) to the INSDC.
RL Center for Infection and Immunity, Columbia University, 722 West 168th
RL Street, New York City, NY 10032, USA
XX
CC GenBank Accession Numbers HM627183-HM627185 represent sequences
CC from the 3 segments of Salobo virus.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4400
FT /organism="Salobo virus"
FT /segment="M"
FT /mol_type="viral cRNA"
FT /db_xref="taxon:427316"
FT CDS 32. .4117
FT /codon_start=1
FT /product="glycoprotein"
FT /protein_id="AED98380.1"
FT /translation="MNYYQIIYLIVLTSGVSSLVRLSSRKSSYLGKICFSAETPAEGVM
FT VYWLSEVSKMSPGAMDCSKAGGDYRKMDRKEMSSYMTDVVESAASGLDDSFSCLGNNEG
FT IEIVSDQIRTEDRPMVVNCDTGNFQEEVRVIGIAGRPPVRMPEKTPVMEDPVEENGAAS
FT RLSEIQKEVELLRLDQANKQKQLNEAIEKMKKLKESHGLEVDKREDELDRLIGEKKRLE
FT GDLNKERSLSTRLENELSILKNEIFRRENNARKIEEEAERKREADLAGRTTKPKTTTVR
FT PLASITPVIMIGLLSASMVSSQMLDHYNNRPDKGKFTLDSEEDDTKQCSAVDYGKECKT
FT LEMLIRSGKYPFFSAHSQHQSLIESLNEEIIGISADGFCNHSNGAAVNEKCNEERAYLK
FT HKCPPGFQSMIFVGGDGGVKGTKCPKGYEVTHDCQFCKKLKTEDEPKANGFVLHLQDVF
FT CQTGGQTYSLTPPAPKGYCSIGEKVYKRCTEFESHYERIPFITLAVAGKVYLSTLEMKN
FT TEEDNKGNYLCYSHVGQHQTSGSMTDTESGVVTLKKVNPDACSSSSSKCVGDAVYCSRH
FT KCVDHKPIAYCMVRSGAGPIKVKMGGMWVAPSCIGYETVLVRKPVVSSPIKPVGKCSSC
FT ISECKKEGILIRASDARIISAVACSGGHCISSHQKPDMEISINYPGAMQSIGGQVGVHL
FT SYEGQTPSDHIVVHCNPVDPCVAHDCYICAHGLINYQCHTTASAFVVVTVIVGSIWLIG
FT TVIFLVLRHLGKAPRRLRTPAKWVTLLLKWIIRMVKRALAERHNELNRRIGWQADVEGG
FT RVNMNPPVQNAARAPRIIPGGGLVRYSTYLSLILMLSPGALCCSETVLASSKIKKCYSE
FT SGKDKCVLSGSVLLRAGPIGSSSCVLIQGLSENQKEFISIRTASSELVCREGQGFWTTL
FT YKPKCMSSRRCHLVGECHGNTCQAWNETRLSSEFSGLENNKVMQENKCFEQCGGIGCGC
FT FNINPSCLMVHTELSTVKPEAVRVFSCSDWVHRVELQVKVPDSEVQTISLGALSTVSTT
FT WGSIGLGLDAEGITGSNSYSFMRSSSGEFALLDEELSLIPRKGFIGEIRCPNEASALAA
FT SSSCVMAEDLIKYKPMTDSIDCTSSLVDPFLMFNMGMLPQTRNGKTFTKSKDGQTIQAM
FT ASSVVEASLSLTFDNLEIEFVVNQPDCTATFLNISGCYSCNAGSRVCLQIKTNKQGTFV
FT AHNSDNSVHFMTNVVGNKEIYCSVLHFARPRVDEKLEYTCGKDKKPLIIRGDLIALDLF
FT TGRNNTGGASVVINPKTGSWSLSSWALDFSDWMGGPLRTVMKTMIMVCLSIIALIVAWN
FT LVRILISRILENRWRKNV"
XX
SQ Sequence 4400 BP; 1271 A; 830 C; 1190 G; 1109 T; 0 other;
hm627183 Length: 4400 03-MAY-2012 Type: N Check: 7239 ..
1 acacaaagac ggtgctttat tttacaattt gatgaactat taccagatta
51 tttacttgat agtcttgacg tcaggagtta gctctcttgt tcgtttaagc
101 tcaagaaaat ccagttactt ggggaaaatc tgcttctcag cagaaacacc
151 agcagaaggg gttatggtct actggctatc agaggtatca aaaatgagcc
201 ctggagcaat ggactgtagc aaagcaggag gagattatag gaaaatggat
251 cggaaagaaa tgagctctta catgacagat gtggttgagt ccgctgctag
301 cggcttggac gacagtttta gctgcctggg gaacaatgag gggattgaga
351 tcgtatctga tcagataagg acagaggata ggccaatggt tgtcaactgt
401 gacacaggaa acttccaaga ggaagtaaga gtaattggga ttgcaggaag
451 gcctcctgtt agaatgccag agaaaacccc tgttatggaa gatccagttg
501 aggagaatgg agctgcaagc aggctaagtg agatacagaa ggaggtggag
551 ctactgcggc tggatcaggc taataagcag aagcaattaa atgaggctat
601 tgagaaaatg aagaagctca aggaatctca cgggctggaa gtggataaga
651 gagaagatga actagacagg ctgattggag aaaagaaaag gctagaagga
701 gacctgaata aggaaagatc tctctctact cgactagaga atgaactgtc
751 tatcctgaag aatgagatct tcaggagaga gaacaatgcc agaaagattg
801 aagaagaggc tgaaaggaag agggaagctg acttggctgg cagaaccact
851 aagcctaaga ccacaactgt gaggcccctt gcttcgataa cccctgtcat
901 aatgattggc ttgctgtcgg cctcaatggt gtcatcacaa atgctggacc
951 attataacaa caggccagac aaggggaaat tcacactaga ctcagaagag
1001 gacgacacaa agcagtgtag tgcggtagac tatggtaagg agtgtaagac
1051 tcttgaaatg cttattagga gtgggaaata ccccttcttt agtgcacata
1101 gtcagcatca gtcactaatc gagtcattga atgaggagat cattggtatt
1151 tcagcagatg ggttctgtaa ccactccaat ggggcagcag tgaatgagaa
1201 gtgcaatgaa gagagggcct acctgaaaca taagtgtccg ccagggtttc
1251 aatccatgat ttttgtgggg ggtgatggtg gtgtgaaagg gactaagtgc
1301 cccaagggct atgaggttac acatgactgt cagttctgca agaaactgaa
1351 gacagaagat gagccaaagg ctaatggatt cgtcctccac cttcaagatg
1401 tcttttgcca gacaggaggt caaacctaca gcctgacacc gccggctcct
1451 aagggatact gttccatagg ggagaaggtt tataagaggt gcacagagtt
1501 tgagtctcat tatgaaagaa tccccttcat cacgttggca gtggcaggga
1551 aggtttatct tagcacgcta gagatgaaga acactgagga ggacaataaa
1601 gggaactacc tgtgctattc acatgttggt cagcatcaga catcaggatc
1651 tatgacagac acagagtctg gagttgtgac cctgaagaag gtaaatccag
1701 atgcttgttc aagctctagc tccaagtgtg ttggggatgc agtttactgc
1751 tccagacaca aatgtgttga ccacaagcca atcgcctact gcatggtgag
1801 gagtggtgcg ggaccaataa aagtgaagat ggggggaatg tgggttgctc
1851 catcgtgtat tggctatgaa accgttttgg tcaggaaacc ggttgtctcc
1901 agcccaataa agcctgtagg caagtgctct tcctgcatta gtgagtgcaa
1951 gaaagagggc atactgatta gggcatcaga tgcaagaatc atctcagcag
2001 tagcttgctc tgggggccac tgcatatcct cacaccagaa acctgacatg
2051 gaaataagta tcaactatcc tggggcaatg cagtcaatag gtggtcaagt
2101 gggggtccat ctgtcatatg agggacagac tccctctgac catattgtgg
2151 ttcattgcaa tcctgtggac ccttgtgttg ctcatgattg ttatatatgt
2201 gcacatggtc tcataaatta ccagtgccat actacggcgt cagctttcgt
2251 tgtagtgacg gtcattgttg ggtcaatctg gctgattggg actgtgatat
2301 ttcttgtgct gaggcatttg ggtaaggctc cacgaagact caggactcca
2351 gccaaatggg taactctctt gctaaagtgg ataatcagga tggtgaaaag
2401 ggctttggca gaaagacata atgaactcaa caggaggatt ggatggcaag
2451 ctgatgtaga gggaggtagg gtgaacatga atcccccagt tcagaatgct
2501 gcaagggctc cgagaataat accagggggg ggtcttgtga gatacagcac
2551 ttacctctct cttattttga tgctctcccc tggggctctc tgctgctcag
2601 agactgttct agccagctct aagataaaga aatgttattc tgaatctgga
2651 aaagacaagt gcgtgttaag tgggtctgtc ctactgaggg ctggaccaat
2701 agggtctagt tcctgtgtgt taattcaggg cctttcagag aaccagaaag
2751 aattcatatc cataaggacg gcttctagcg agctggtttg cagagaagga
2801 cagggattct ggacaacctt gtacaagcct aagtgcatga gctccaggag
2851 atgtcacttg gtgggagaat gtcacgggaa cacttgtcag gcatggaatg
2901 aaactaggct ctcatctgag ttctcagggc ttgagaataa caaggtcatg
2951 caggagaata aatgctttga gcaatgtggt ggcattggat gtgggtgctt
3001 caatataaat ccctcctgtc taatggttca cacagagttg tcaactgtaa
3051 agcctgaggc agtcagagtg ttctcttgct cagactgggt gcacagggtg
3101 gagttacagg tcaaagttcc agactcagag gtgcagacca tctccttagg
3151 agcattatca actgtctcaa caacatgggg cagcatagga ctgggtttgg
3201 atgctgaagg cataacaggc tccaattcat atagcttcat gagatctagt
3251 tctggagagt tcgcacttct tgatgaggag ctctcactta tacccaggaa
3301 gggtttcata ggggagattc gttgcccaaa tgaagcatct gctcttgctg
3351 cgagtagcag ttgtgtcatg gctgaagatc tcataaagta caagcctatg
3401 acagacagca ttgactgcac atcctcgtta gtggaccctt tcttaatgtt
3451 caacatgggg atgttgccac agacacgaaa tgggaaaacc ttcacgaagt
3501 ctaaagatgg ccaaacaatt caggccatgg ctagttcagt ggtggaggca
3551 agcctctctc taacatttga caacttagag atagagttcg tagtaaatca
3601 gccagactgc acagccacat tcttgaatat tagtggctgc tattcctgca
3651 atgcaggatc aagagtgtgc ttgcaaatca agacgaacaa gcaaggaacc
3701 tttgttgctc ataattcaga caactctgtc cacttcatga ccaatgttgt
3751 tggaaataag gagatttatt gttccgttct gcattttgct agaccaagag
3801 ttgatgagaa gctagaatac acatgtggaa aggacaagaa gcctttgatc
3851 attagaggag acttgatagc actagacctg tttactggga ggaacaacac
3901 aggaggggct tctgttgtga tcaatccaaa gacaggatcg tggagtctat
3951 cttcctgggc tctggacttc tctgattgga tgggaggtcc tctgagaaca
4001 gtgatgaaga ctatgataat ggtctgtctg tccatcattg ctctcatagt
4051 tgcatggaat ctggttagaa ttctgatatc cagaatttta gaaaacaggt
4101 ggaggaaaaa tgtgtgacac agagatatat gagagaatct aaactaaact
4151 gagtgtgagt aagggacgtt ctggtctaat tgactaaaga aggtgtttaa
4201 atcatggggg gtgggggggc taggcagcct agatgtgtga tcagctggaa
4251 agacttgatg catgatggtc ctcaaattaa gggtagtcag tcctgtgtgg
4301 tcttgtgcag agttatatct catccaaacc agaggagata ttatgtgggt
4351 ctttcgctgt tttaggatgt tatttttgat ctttgcaccg gtctttgtgt