Sequence of DPV Oyo virus
Oyo virus segment M polyprotein gene, complete cds.
ACC No: HM639779
Dated: 2012-05-03 | Length: 4376 | CRC: 2123208600
ID HM639779; SV 1; linear; viral cRNA; STD; VRL; 4376 BP.
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AC HM639779;
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DT 03-MAY-2012 (Rel. 112, Created)
DT 03-MAY-2012 (Rel. 112, Last updated, Version 1)
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DE Oyo virus segment M polyprotein gene, complete cds.
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KW .
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OS Oyo virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Orthobunyavirus;
OC unclassified Orthobunyavirus.
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RN [1]
RP 1-4376
RA Palacios G., Savji N., Tesh R., Bussetti A.V., Lipkin W.;
RT "Genetic Diversity of Orthobunyaviruses";
RL Unpublished.
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RN [2]
RP 1-4376
RA Palacios G., Savji N., Tesh R., Bussetti A.V., Lipkin W.;
RT ;
RL Submitted (07-JUL-2010) to the INSDC.
RL Center for Infection and Immunity, Columbia University, 722 West 168th
RL Street, New York, NY 10032, USA
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CC GenBank Accession Numbers HM639778-HM639780 represent sequences
CC from the 3 segments of Oyo virus.
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FH Key Location/Qualifiers
FH
FT source 1. .4376
FT /organism="Oyo virus"
FT /segment="M"
FT /mol_type="viral cRNA"
FT /country="Nigeria"
FT /collection_date="1964"
FT /db_xref="taxon:1027632"
FT CDS 42. .4337
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="AEE01390.1"
FT /translation="MSLMENHIILFLLALSNSAMSIPTENCFQGGHVVKHEVMNHGVTN
FT LCLKDDVSILKISSTQQRNKTMFDNTVSRFWNVKNWHKCNPVPVIDGTFIVYDIDKFFN
FT VVPKVFSCKSECRIHIDKDEGCIILSSEHMNHYTISGTSTTTGWFRSKTNIPLQNTCEH
FT ITISCGTNRHTVHACFKTHMSCIRFFKNTILPNRMSKSFCSNIEVILITSFALITYIIL
FT LILSGTYIIYLLLPIMWPITYIFGKLYSKSCVKCRDCSLPMHPLSKCGTECMCGTEFGT
FT TERLKKHRESQLCKGYKSGPAARTLCKNKGSNLVLSIFLSVIFFSFLTPINAECYTIDE
FT ITDVLLNNPKSSSTYFDIQNIIIWSISFSILIIVMLYKKLEETYTNKTVLHCTECSMFH
FT RLHGLKRNGDFTNKCESCICGFTANFYHEPEGEYETINPYVHTLRESCLYSVSRNFQKL
FT FKIFIVVVILLNSMSPVFGTCIHQDADLLKCGAYNLTDDCEKNRIHSEIVEKAKEFLHP
FT VEMNVLDIMRLNISTIQKYIEVSNNMHYKIIIEKLLYTKYCKYFTNLFNGNAEESASFR
FT FYLYTHQLSLCVEKPIYDLCRCLARHINCHAASIDVIPSAVFYKLPNGHYNHDLNIALR
FT GIYFAFRGIVGGNIYMLVKEKKTDTLVSYLESFLGKINKNFELKAIIEFSINLLKMNIP
FT YTLDDHWPEIGVPENLPQARGINARINISIGDPIYECNSAYIVSCTSKLPNMPNMQFYE
FT CDNKHYRMPAEGGVFFKNRLCVGDTFCIKQFQPVFSNLTIGGLVCIKSNPQVDTVWSKE
FT SKSCEMEDIGHCLIKNLNTSLILCSDNKLYHTDKNIQHSGSSNIVDYCFSKDCSKRRPI
FT NPLNVQNCIWDSNKMHKLGASIINYQSIESYKQTLETTIEGDLNIHKFVGTSKYPIILP
FT TYKSIYIQGVENDNGIENAYIQGEIPIFAGSSNGLHIYTKEGNIIFDVIIYVKQAEYTS
FT TYNEIYKTGPTIGINTRHNEECTGKCPSHFQHHRKNWIYFSREHTSTWGCEEFGCLAIG
FT VGCVYGECQDIIRPEASVFKKETDDQPNVEFCIVLSHKSECTHINILQPIMTDHFEFMF
FT ENTEVQTMPELVFIKKNKVFVGQINDVNGFAKECGNVKMINREVIGDGDPIFDYLCYPM
FT HRKDIVVKKCYTNSYHMCTMLREDKTLIFNPNNSHITIHKQGLKLGTLKYKVKLGDVLY
FT KQYVNSIQIDGQGKCVGNIHSSSGISCEIVIDSNGISTCRIESNCKPSHVNTEIIAGNQ
FT KLFLKMQCYNNNPVSIRICNIDLKIESHLSVTHETIDITHISDSHYIIEKDEKCKTWLC
FT KAVDEGISNIFDGFLTSFTKYFYIAYCYNSSCYCSFVNILYFHSSWEVHKKTPSSSSNF
FT RRNGQEISLKLTVYNWLYQKLGFPNTITA"
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SQ Sequence 4376 BP; 1607 A; 664 C; 760 G; 1345 T; 0 other;
hm639779 Length: 4376 03-MAY-2012 Type: N Check: 8292 ..
1 agtagtgtgc tccacttaaa caaaaacaac cacataacaa tatgtcttta
51 atggagaatc atataatact ttttttgctc gcattgtcca actcagctat
101 gagtatccct acagaaaact gtttccaggg agggcatgtt gtaaagcatg
151 aggtaatgaa ccatggagtt acaaatttgt gcttaaaaga tgatgtttct
201 attttaaaaa tatcaagtac tcagcaaaga aacaaaacaa tgtttgataa
251 tactgtgtca cgattttgga atgttaagaa ttggcataaa tgcaatccag
301 tacctgtgat tgacggaact tttatagttt atgatataga taaatttttc
351 aatgttgtac caaaagtttt ttcgtgtaag tctgagtgca gaatacatat
401 agacaaagat gaaggctgta taatcttgtc aagcgaacat atgaatcatt
451 acacaatttc aggtacatca acaacaactg gatggtttcg atcaaaaaca
501 aatataccat tgcagaatac atgtgagcat atcacaatat cctgcggtac
551 aaataggcac acagtccatg catgcttcaa aactcacatg tcatgtatta
601 gattctttaa aaacacaata ctaccaaata gaatgtcaaa gtctttctgt
651 tcgaatatag aagtaatttt aatcacaagc tttgcattaa tcacatatat
701 catattacta atattatctg ggacatatat tatctatctg cttttaccaa
751 ttatgtggcc aataacttac atatttggaa agctttattc aaaatcttgc
801 gttaagtgca gagattgttc attgcccatg catcctttat ccaaatgcgg
851 gactgagtgc atgtgtggaa cagaatttgg gacaactgaa cggctgaaaa
901 aacataggga aagccaatta tgcaaaggat ataagtctgg tccagctgct
951 agaactttgt gtaaaaataa aggatcaaat ttggtgttga gcatatttct
1001 ctctgttata tttttttctt ttctaacacc tattaatgct gaatgctata
1051 caattgatga aataacagac gtattattaa acaatcctaa aagcagtagt
1101 acttattttg atattcagaa catcataata tggagcatta gcttctctat
1151 attaataata gtgatgctgt ataagaaatt agaagaaact tatacgaaca
1201 aaactgtctt gcattgtact gaatgttcta tgttccatag attacatggc
1251 ttgaaaagga atggagactt tacgaacaaa tgtgaatcat gtatatgtgg
1301 gtttacagca aatttctacc atgaaccaga aggtgagtat gaaacaatca
1351 acccttatgt tcatacatta cgagagagtt gcttgtattc cgtcagcagg
1401 aacttccaaa aactctttaa aatattcata gttgtagtga tattgctgaa
1451 cagtatgagt ccagtatttg gcacatgtat acatcaagat gctgatttat
1501 tgaaatgtgg agcatataat ttaacagatg attgtgaaaa aaacaggatc
1551 catagcgaga tagttgaaaa ggccaaagag ttcttgcatc cagtggaaat
1601 gaatgtactt gacatcatgc gattaaatat aagtactata caaaaatata
1651 tagaggtatc aaacaatatg cattacaaaa taataattga aaaactgcta
1701 tatacaaaat attgtaagta ttttactaac ctattcaatg gtaatgcaga
1751 agaatctgca tctttcagat tttatctata tacccatcag ctctcactat
1801 gtgttgaaaa gccaatttat gatttatgtc ggtgtctagc aagacatata
1851 aactgccatg ctgcatctat cgatgtgata ccttctgctg tattttataa
1901 attgcctaat ggtcactata atcatgactt aaatattgct ttaagaggga
1951 tttattttgc atttagagga atagttgggg gcaatatata tatgttagtc
2001 aaagagaaaa aaacagatac tcttgttagt tatttagaaa gctttttagg
2051 gaaaataaac aaaaattttg aactaaaggc tatcatagaa ttttctatta
2101 atttattaaa aatgaatatt ccatatacac ttgatgacca ttggccagaa
2151 ataggtgtcc cagagaattt accgcaagct agggggatca atgcaaggat
2201 aaatatttca attggagatc ctatatatga atgtaactcc gcatacatag
2251 tttcctgcac aagcaagttg cctaatatgc ctaatatgca attctatgaa
2301 tgtgacaaca agcattatag aatgccagca gagggaggag tattctttaa
2351 gaatagatta tgtgtaggtg acactttctg tataaaacag ttccaaccag
2401 tctttagcaa tttaacaata ggaggattag tatgtataaa atcaaaccct
2451 caagttgata ctgtctggag taaagaatca aaaagttgtg agatggaaga
2501 tattgggcat tgcttaataa aaaaccttaa tactagtcta atattatgtt
2551 ctgataacaa actttaccat actgataaaa acatacaaca ttcaggcagt
2601 agtaatattg tagattactg cttctcaaag gactgcagca agaggagacc
2651 tattaaccca ttaaatgtgc aaaattgcat ttgggactct aataaaatgc
2701 acaaattggg tgctagcatt atcaattatc aaagtattga atcatacaaa
2751 cagacattgg aaacaacaat agagggagat ttgaacatac ataaatttgt
2801 cggcacttca aaatacccta ttatactccc tacatataaa agtatttaca
2851 ttcaaggcgt agaaaatgat aacggtatag aaaatgcata tattcaagga
2901 gagatcccaa tattcgcagg atcaagcaat ggtttacaca tttatacaaa
2951 ggaaggaaat ataatctttg atgtaataat ctatgtaaaa caagcagaat
3001 atacatcgac ttataatgaa atatataaaa cagggcctac aattgggata
3051 aacacaagac acaatgaaga atgcacaggg aaatgtccaa gtcattttca
3101 gcaccataga aagaattgga tttatttttc aagagaacat acgagcacct
3151 ggggctgtga agagtttgga tgtttagcca ttggtgttgg atgtgtttat
3201 ggtgaatgtc aggacataat cagaccagag gcttctgtat ttaaaaaaga
3251 gacagatgac caaccaaatg tagaattttg tattgttctt tcacacaaat
3301 ctgagtgcac tcatataaat atattgcagc ccataatgac tgaccatttt
3351 gaatttatgt ttgagaatac agaagttcaa acgatgccag aattggtttt
3401 tataaagaaa aacaaagtat ttgtaggcca gataaatgat gtaaatggat
3451 ttgctaaaga atgtggcaac gtaaaaatga taaatagaga agtaattgga
3501 gacggtgatc ccatttttga ttatttatgt taccctatgc acaggaaaga
3551 tattgttgta aagaagtgct atacaaatag ctatcatatg tgtactatgc
3601 tgagggaaga taaaactcta attttcaacc cgaataattc ccatatcaca
3651 atccataaac agggcttaaa gttaggcaca ttaaaataca aagtaaaatt
3701 aggagatgtt ctctataaac aatatgttaa ttcaattcaa attgacggtc
3751 aaggaaaatg tgttgggaat atccattcat ccagtggtat ctcttgcgag
3801 attgtaatag atagcaatgg aataagtact tgccgaatag aatcgaattg
3851 taagccttca catgtcaata ctgaaataat tgcagggaat caaaaattat
3901 ttttaaaaat gcagtgttac aacaataacc ctgtatctat tagaatatgc
3951 aatattgatt taaaaattga atcacaccta tcagttaccc atgaaacaat
4001 cgacatcacc cacataagcg attcccatta tataattgaa aaggatgaaa
4051 aatgcaagac ctggctttgt aaagccgtag atgaagggat aagcaatata
4101 tttgatggtt ttcttacctc attcacaaag tatttctata tagcatattg
4151 ctataatagt agctgttatt gtagctttgt taatatactt tattttcatt
4201 ccagctggga agttcataaa aaaacacctt caagctcaag caattttaga
4251 agaaatggac aggaaattag tttaaaatta accgtttata attggctata
4301 ccaaaagttg ggttttccca acacaataac tgcttaattt cttgaatgtt
4351 tttgttttaa atggtagcac actgga