Sequence of DPV Eothenomys miletus hantavirus LX309

Eothenomys miletus hantavirus LX309 segment small, complete sequence.

ACC No: HM756286

Dated: 2011-05-31 | Length: 2107 | CRC: 734568894

                
ID   HM756286; SV 1; linear; viral cRNA; STD; VRL; 2107 BP.
XX
AC   HM756286;
XX
DT   31-MAY-2011 (Rel. 109, Created)
DT   31-MAY-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Eothenomys miletus hantavirus LX309 segment small, complete sequence.
XX
KW   .
XX
OS   Eothenomys miletus hantavirus LX309
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Hantavirus;
OC   unclassified Hantavirus.
XX
RN   [1]
RP   1-2107
RX   PUBMED; 21402592.
RA   Zhang Y., Yuan J., Yang X., Zhou J., Yang W., Peng C., Zhang H.L., Shi Z.;
RT   "A novel hantavirus detected in Yunnan red-backed vole (Eothenomys miletus)
RT   in China";
RL   J. Gen. Virol. 92(Pt 6):1454-1457(2011).
XX
RN   [2]
RP   1-2107
RA   Zhang Y.-Z., Yuan J.-F., Yang X.-L., Zhou J.-H., Zhang W.-H., Zhang H.-L.,
RA   Peng C., Shi Z.-L.;
RT   ;
RL   Submitted (13-JUL-2010) to the INSDC.
RL   Wuhan Institute of Virology, Chinese Academy of Sciences, 44 Xiao Hong
RL   Shan, Wuhan, Hubei 430071, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2107
FT                   /organism="Eothenomys miletus hantavirus LX309"
FT                   /segment="small"
FT                   /host="Eothenomys miletus"
FT                   /isolate="LX309"
FT                   /mol_type="viral cRNA"
FT                   /country="China"
FT                   /isolation_source="lung"
FT                   /collection_date="Sep-2009"
FT                   /db_xref="taxon:943342"
FT   CDS             43. .1359
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /protein_id="ADV33302.1"
FT                   /translation="MSQLTDLQEEVTRHEQQLVIARQKLKDAERAVEVDPDEVNKSTLQ
FT                   SRRAAVSTLENKLGEFKRQLADLVAKQKMDERPADPTGVEPDDHLKERSTLRYGNVIDV
FT                   NSIDLEEPSGQTADWMSIGTYIMGFTLPIVLKALYMLSTRGRQTIKENKGTRIRFKDDS
FT                   SFDDINGIRRPKHLYVSLPTAQSTMKADEITPGRFRTIVCGLFPAQIKARNIISPVMGV
FT                   IGFAFFVKDWAEKIDQFLKSPCPFLKTPAGKLGFDDDDEDDPAGLLTSNLAYLTNRQRQ
FT                   LEESMVTDITDLIETAAQGDPTLFKDIDSPQSVWVFSCAPDRCPPTCLYVAGMAELGAF
FT                   FSILQDMRNTIMASKSVGTADEKLKKKSAFYQSYLRRTQSMGIQLDQRIILLFMLQWGK
FT                   DVVNHFHLGDDMDPELRVLAQSLIDVKVKEISNQEPLKL"
XX
SQ   Sequence 2107 BP; 655 A; 362 C; 451 G; 639 T; 0 other;

hm756286 Length: 2107  31-MAY-2011  Type: N  Check: 822  ..

       1  tagtagtaga ctccttgaga agctactact acaaacgctg ggatgagcca
      51  actcactgac ttgcaagaag aagtaacccg ccacgaacaa caactcgtga
     101  tagcaaggca aaaattgaag gatgccgaga gggcagttga agtggaccca
     151  gatgaagtta acaagagtac actccagagc agacgggcgg cagtgtcaac
     201  actggaaaat aaactcggag agttcaaaag acagctggca gatctggtgg
     251  caaaacagaa gatggatgag agacccgctg acccgactgg tgtggaacct
     301  gacgaccatc tcaaggaacg gtccactctg aggtatggga atgtgattga
     351  tgtgaattca attgatcttg aagaaccaag tggtcagact gctgattgga
     401  tgtcaatagg gacatacatt atgggattca cattacctat tgtgttgaaa
     451  gcattgtata tgttatccac acgagggaga caaactatca aagagaacaa
     501  aggcacaaga attcggttta aagatgacag ctcttttgat gacataaatg
     551  gaattagaag accgaaacat ctatatgtct ccttgccgac tgcccagtca
     601  actatgaagg ctgatgaaat aacaccaggc aggtttcgaa caattgtttg
     651  tgggctcttc ccggcacaaa taaaagcaag aaatattata agtcccgtga
     701  tgggggtgat tggctttgca ttttttgtaa aggattgggc agagaaaata
     751  gatcagtttt tgaaatcacc atgcccgttt ttaaaaacac ctgctgggaa
     801  attgggtttc gacgatgatg atgaagatga ccctgcaggc ctcttaacat
     851  caaatctagc ctatttaaca aaccggcaaa ggcaacttga agaatccatg
     901  gtcacagaca taacagactt gatagaaaca gctgcacaag gtgatccaac
     951  actattcaaa gatatagatt caccacagtc agtttgggtc ttctcttgtg
    1001  ccccagacag gtgtccacca acttgcctgt atgttgcagg aatggctgaa
    1051  cttggtgcat ttttttctat tctacaggac atgagaaaca caattatggc
    1101  atcaaaatct gtagggactg ctgatgaaaa gttgaaaaag aaatcagcat
    1151  tctatcagtc ctacctccgg agaacacagt ctatggggat tcaactggac
    1201  caaaggataa ttctactatt catgctgcaa tggggcaagg atgttgtgaa
    1251  ccatttccac ctaggtgatg acatggatcc tgagctacgg gtgcttgctc
    1301  aatccctaat tgatgtgaaa gtgaaagaaa tttcaaacca ggagcctttg
    1351  aagctctaag tatttatggc agctgggggt gggggttgtg ctcatgtaat
    1401  cacacattca caggcagcta aattaatacg ggtcataact gggatattag
    1451  taagggtcat taatcagggt cacaatttgc actacatgta gacaattagt
    1501  tagagtgagt attaattatt aagttggtta aataagtgtt aattgttaag
    1551  ttagttgttt aaatttatgt tattaatgtt aagtttgttg ttaagcttag
    1601  taatgttaag ttgataatta gttatgtcat gtaccctatg ttagtattgg
    1651  taagttgatt gttttattta gtgttaataa gttagtctta ttatattatt
    1701  gttagtatga ttaaggtgtt atataagtgt attggtgttg atagtctgtt
    1751  gttatgtatt agtgattgat gatgtaaact atattagcta tcattattag
    1801  ttagtattaa tagtaaaagt tagctagtca ttgttactgt tttatagtta
    1851  ttgcagttgt tagtggtgtt gaatcattaa tatgtgaatt aaagtgtcag
    1901  gatgtttaca gccagcttta cttacctgct ttatcttaat tatatactaa
    1951  accgcttact ttcttctttt cctttcttct cttttttact aacaaactaa
    2001  acccttattt actaacaacc ataccctatc tacctcaaat taaactaacc
    2051  actctatact acctcattag tgttttcttt gattgctttt caaggagcct
    2101  actacta