Sequence of DPV Eothenomys miletus hantavirus LX309
Eothenomys miletus hantavirus LX309 segment middle, complete sequence.
ACC No: HM756287
Dated: 2011-05-31 | Length: 3663 | CRC: 1042614194
ID HM756287; SV 1; linear; viral cRNA; STD; VRL; 3663 BP.
XX
AC HM756287;
XX
DT 31-MAY-2011 (Rel. 109, Created)
DT 31-MAY-2011 (Rel. 109, Last updated, Version 1)
XX
DE Eothenomys miletus hantavirus LX309 segment middle, complete sequence.
XX
KW .
XX
OS Eothenomys miletus hantavirus LX309
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Hantavirus;
OC unclassified Hantavirus.
XX
RN [1]
RP 1-3663
RX PUBMED; 21402592.
RA Zhang Y., Yuan J., Yang X., Zhou J., Yang W., Peng C., Zhang H.L., Shi Z.;
RT "A novel hantavirus detected in Yunnan red-backed vole (Eothenomys miletus)
RT in China";
RL J. Gen. Virol. 92(Pt 6):1454-1457(2011).
XX
RN [2]
RP 1-3663
RA Zhang Y.-Z., Yuan J.-F., Yang X.-L., Zhou J.-H., Zhang W.-H., Zhang H.-L.,
RA Peng C., Shi Z.-L.;
RT ;
RL Submitted (13-JUL-2010) to the INSDC.
RL Wuhan Institute of Virology, Chinese Academy of Sciences, 44 Xiao Hong
RL Shan, Wuhan, Hubei 430071, China
XX
FH Key Location/Qualifiers
FH
FT source 1. .3663
FT /organism="Eothenomys miletus hantavirus LX309"
FT /segment="middle"
FT /host="Eothenomys miletus"
FT /isolate="LX309"
FT /mol_type="viral cRNA"
FT /country="China"
FT /isolation_source="lung"
FT /collection_date="Sep-2009"
FT /db_xref="taxon:943342"
FT CDS 59. .3478
FT /codon_start=1
FT /product="glycoprotein"
FT /protein_id="ADV33303.1"
FT /translation="MWQLMLLWGLLQGMTCVARNVLEMRIECPHTLGLGQGLLIGSAEL
FT PPVHVDTIPSLKLESSCNFDIHTAPLAQQQVTKWTWEKKADTTESTNAASTTFQSKSSE
FT VQLKGLCVVPPLTFETANKLRKTVTCFDISCNQTHCQPTVYLVAPIQTCLTTKSCMLGL
FT GDMRIQVSYEKTYCVSGQLIEGSCFNPIHTMALSQPSHTYDIFTLLVKCFFVAKKQANQ
FT ESLKIEKKLETIMGKSDCSNNNLQGHYTCFLGTSSEPIYVPLLEDYRSAEILSRMGTAP
FT HGEDHDLDNQAMGHVRVVGKLTGKAPSSESSDTVQGVAFSGLPMYTSLSVMTAKEDPVY
FT VWSPGIIGEANHTRCDKKMIPLTWTGYVPIPGEVEKTTTCTVFCTLAGPGADCEAYSET
FT GIFNISSTSCLINRVQRFRGSEQQIKFVCQRIDADITVYCNGMKKVILTQTLVIGQCIY
FT TITSLFSLAPSIAHSLAVEVCVPGLHGWVTTALLLTFCFGWILIPSITYLVLKFLLLFT
FT FLFSKYNTESKFKSILERVKQEYKKTMGSMVCEVCCQECETVKELESHNKSCPNSHCPY
FT CMNPTEATETALQAHFKVCKLTNRFHENLKKSLGGYEPKQGCYRTLSVFRYKSRCYVGM
FT VWIVLLIIESVLWAASADVADVKVGWTDVAHGVALIPLRTDIELDFSLPSSATYTYRRI
FT LQNPANEAEKIPFHFQLDRQVIHAEIQSLGHWMDGTFNLKTSFHCYGACEKYSYPWQTS
FT KCFSERDFQYESGWGCNPIDCPGVGTGCTACGVYLDKLKSVGKVFKIISLKYTRRVCIQ
FT LGQEQTCKTIDSNDCLITTSVKVCIIGTVSKFQPGDTLLFLGPLEQGGIIFKQWCTASC
FT QFGDPGDIMTAPNGMKCPEHTGTFRKKCSFATIPSCEYDGNTISGFKRMMATRDSFQSF
FT NISDVHITTNALEWIDPDSTLKDHINMVFNRDISFQDLAENPCKVGMTTTSIDGAWGSG
FT VGFSLTCSISLTECASFMTAIKACDKSMCYGAKTVTLVRGQNTVIIVGKGGHSGSKFKC
FT CHNDDCSTTGLLASPPHLDRVTGYNQLDTDKVFDDGAPECGIKCWFTKSGEWFLGILNG
FT NWIVIAVLIFILIISLFLFSLCCPVRSRSQRT"
XX
SQ Sequence 3663 BP; 1155 A; 623 C; 767 G; 1118 T; 0 other;
hm756287 Length: 3663 31-MAY-2011 Type: N Check: 7220 ..
1 tagtagtaga ctccgcaaga agaagcaata actataagcc aaggaataag
51 gtagtaaaat gtggcagtta atgcttcttt ggggcctact acaaggaatg
101 acttgtgtgg cgagaaatgt gttagaaatg aggattgaat gtccacatac
151 tcttggttta ggacaaggtt tattgatcgg ttcagctgaa ttgccaccag
201 tgcatgtaga cactatccct tcattgaagt tagagagttc atgcaatttt
251 gacatacata ctgcaccttt ggcacaacag caagttacta aatggacatg
301 ggagaagaaa gctgatacga ctgagtcaac aaatgcagca tcaaccacat
351 ttcagtcaaa gagttcagag gttcagctaa aaggactttg tgttgtgcca
401 cctctgacat ttgagacagc aaacaagctg agaaagacag taacttgttt
451 tgacatatca tgtaatcaga cccattgtca acctacagtt tatctagttg
501 ctccaataca gacatgttta acaacaaaga gctgtatgtt agggttaggt
551 gacatgagaa ttcaggttag ttatgaaaag acatattgtg tttcaggtca
601 gttaattgag ggttcttgct tcaatcccat tcatacaatg gctttatctc
651 aacctagtca cacatatgat atattcactt tactagtaaa atgttttttt
701 gtggctaaaa agcaggcaaa tcaagaaagc cttaagatag agaaaaagct
751 agaaactata atggggaaat ctgattgttc aaataataat ctacaaggac
801 actatacttg tttcttagga acaagttcag aacctatata tgtcccatta
851 ctagaagact acaggtctgc tgagattttg tcaaggatgg gaactgcacc
901 tcatggagaa gatcatgact tagacaacca ggctatgggc catgttaggg
951 tagtaggaaa gctgacagga aaagcaccat catcagaatc ttcagacaca
1001 gtgcaaggtg ttgccttttc aggactacca atgtatacat cattgtcagt
1051 catgacagca aaggaagacc cagtctatgt ctggtcacca gggataatag
1101 gagaagcaaa tcatacacgg tgtgataaga agatgatccc tttaacatgg
1151 acaggctatg ttcctatacc tggcgaggta gaaaaaacaa ccacatgcac
1201 agtgttctgc accttggccg gcccaggtgc tgattgtgag gcttattcag
1251 agactggtat tttcaatatc agttcaacat cttgtttaat aaatagggtc
1301 cagagattcc gaggttctga acagcaaata aagtttgttt gccaaaggat
1351 agatgctgat ataacagttt attgtaatgg gatgaagaag gtaatattaa
1401 cacaaacctt agtgataggt caatgtattt atacaataac aagcttattt
1451 tctttagctc ctagtattgc acattctctt gcagtcgaag tctgtgtccc
1501 tggcctacat ggttgggtta caactgcatt gcttttaaca ttttgttttg
1551 gctggatctt aatacctagt attacttatt tggtcttaaa gtttttactg
1601 ctatttacct ttttattttc taagtataat actgaatcaa aattcaaaag
1651 tatattagag agagtcaagc aagagtacaa aaagacgatg ggttctatgg
1701 tttgtgaagt atgctgtcaa gagtgtgaga ctgttaagga gctagaatca
1751 cataacaaga gttgtcctaa tagccattgt ccttactgta tgaatccaac
1801 agaagcaaca gaaacagcat tacaggctca ttttaaagtg tgtaagctta
1851 caaatagatt ccatgaaaat cttaaaaaat ctcttggagg ttatgagcca
1901 aagcaaggtt gttataggac tctctcagtt tttagatata agagtcgttg
1951 ttatgttggc atggtttgga tagtactctt aattattgag tctgtgctat
2001 gggctgcaag tgcagatgtg gcagatgtaa aagtgggctg gacagatgtt
2051 gcacatgggg tagccttaat tcccctccga acagacatag agttggactt
2101 ttctttacca tcatcagcca cttacactta tagaagaatt ttacagaacc
2151 cagccaatga agctgagaaa ataccattcc attttcagct agatagacag
2201 gtgattcatg ctgaaataca atcattagga cattggatgg atggaacatt
2251 taacttgaag acatcatttc attgttatgg tgcttgcgag aagtactcat
2301 atccatggca gacctcaaag tgttttagtg aaagggattt tcagtatgaa
2351 tcaggttggg gttgtaaccc tatagactgc cctggagtgg ggacaggctg
2401 tactgcttgt ggggtttatt tggacaaatt aaaatcagta ggaaaagtct
2451 ttaaaatcat ttcactaaaa tatacgcgca gagtttgtat acaattaggt
2501 caagaacaaa cttgcaaaac tatagactct aatgactgtc tcatcacaac
2551 ttcagttaaa gtctgtataa tcggaacagt gtctaaattc caaccaggtg
2601 atacattgct tttcttagga ccattagaac aaggagggat aatttttaag
2651 cagtggtgca ctgcttcttg tcaattcggt gatccaggag atattatgac
2701 tgccccgaat ggaatgaagt gtccagagca tacaggcact tttagaaaaa
2751 aatgcagttt tgccactatt cctagttgtg aatatgatgg gaacacaatc
2801 tcaggcttta agaggatgat ggcaacacga gattcatttc agtcatttaa
2851 cattagtgat gttcacatta caacaaatgc actggaatgg atcgatcctg
2901 atagtacatt aaaggaccat atcaatatgg ttttcaacag ggatatttca
2951 tttcaagacc ttgcagagaa tccatgtaaa gtggggatga ctacaacatc
3001 tattgatggg gcctggggtt caggcgttgg attcagtctt acttgttcta
3051 ttagcttgac agaatgtgct tcatttatga cagcaataaa ggcttgtgat
3101 aagtctatgt gctatggagc aaaaacagta acacttgtta gaggacaaaa
3151 cacagtaatt attgttggta aagggggtca ttcaggttct aaattcaagt
3201 gttgtcataa tgatgattgc tccacaacag gactgcttgc ttctcctcca
3251 catttggata gagtaaccgg ttacaatcaa ctggacactg ataaagtgtt
3301 tgatgacgga gctccagagt gtgggatcaa atgctggttc accaaatctg
3351 gtgaatggtt tctagggatc ttaaatggta attggattgt gattgcagtt
3401 ttaatcttta tccttataat ttcattgttt cttttcagtt tatgttgtcc
3451 tgttcgaagt cgatcacaga gaacttaaga atgtacaacc tttaaactat
3501 ctggctttaa tctttattat tataaaacat tatatttagt attaacccat
3551 attttatgat tggtattgtt attgacttat actctaaaaa aaactaattt
3601 cgcattattg ttaaacctca tactagtttt accaagattt tgttcctgcg
3651 gagtctacta cta