Sequence of DPV Iris yellow spot virus

Iris yellow spot virus isolate 18 nucleocapsid (N) gene, complete cds.

ACC No: HQ148174

Dated: 2011-02-01 | Length: 822 | CRC: 1256144986

                
ID   HQ148174; SV 1; linear; genomic RNA; STD; VRL; 822 BP.
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AC   HQ148174;
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DT   01-FEB-2011 (Rel. 107, Created)
DT   01-FEB-2011 (Rel. 107, Last updated, Version 1)
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DE   Iris yellow spot virus isolate 18 nucleocapsid (N) gene, complete cds.
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KW   .
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OS   Iris yellow spot virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-822
RA   Beikzadeh N., Jafarpour B., Rohani H., Kormelink R., Peters D.,
RA   Hassani-Mehraban A.;
RT   "First report of Iris yellow spot virus (IYSV) on onion in Iran";
RL   Unpublished.
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RN   [2]
RP   1-822
RA   Beikzadeh N., Jafarpour B., Rohani H.;
RT   ;
RL   Submitted (16-AUG-2010) to the EMBL/GenBank/DDBJ databases.
RL   Department of Plant Protection, College of Agriculture, Ferdowsi University
RL   of Mashhad, Mashhad, Iran
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RN   [3]
RP   1-822
RA   Kormelink R., Peters D., Hassani-Mehraban A.;
RT   ;
RL   Submitted (16-AUG-2010) to the EMBL/GenBank/DDBJ databases.
RL   Laboratory of Virology, Wageningen University, Droevendaalsesteeg 1,
RL   Wageningen 6708, The Netherlands
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FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Iris yellow spot virus"
FT                   /host="Allium cepa"
FT                   /isolate="18"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran:Khorasan Razavi Province"
FT                   /isolation_source="onion leaf"
FT                   /collection_date="20-Jul-2009"
FT                   /db_xref="taxon:60456"
FT   gene            complement(1. .822)
FT                   /gene="N"
FT   CDS             complement(1. .822)
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /protein_id="ADW08941.1"
FT                   /translation="MATVRVKPSEIEKLLSGGDVDVVIESDETEGFNFKKFVLANEGVQ
FT                   MTFNNGYTILRNRAGIYKTIKSGKFTFQGKTIVIPSANVSPNQDDWTFRRLEGFIRARM
FT                   LVELIEAKNEKEKQKMHEKICGLPLVSAYGLKPSSKFDATTARIMLTLGGPLTLLASLD
FT                   IFAAAALPLAYFQNVKKEALGISRFSTYEQLCKVARVMAAKEFKFTEKYKKIFDETVKI
FT                   LTDCTPGTSGAASLIKFNEQIKILEGAFGKIVEDIGESSKPKNPPKERRYN"
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SQ   Sequence 822 BP; 217 A; 180 C; 144 G; 281 T; 0 other;

hq148174 Length: 822  01-FEB-2011  Type: N  Check: 5029  ..

       1  ttaattatat cttctttctt tggggggatt ttttggttta gaagactcac
      51  caatgtcttc aacaatcttt ccaaaagcac cttcaagaat tttaatctgt
     101  tcattgaatt tgatcaatga agcagcacct gaagttccag gagtgcagtc
     151  agtgaggatc ttcacagttt catcaaaaat ctttttgtat ttctctgtga
     201  atttgaattc ctttgctgcc atgactcttg caactttgca gagttgctca
     251  taagttgaaa atctgcttat accgagtgct tcttttttga cattctggaa
     301  ataagctaat ggaagagcag ctgcagcaaa gatgtcaaga cttgctagca
     351  aagtgagagg accacctagt gtcagcatga tcctagctgt agttgcatca
     401  aacttgctac taggctttaa accatatgcg ctcaccagag gaagcccgca
     451  gattttttca tgcatttttt gcttctcttt ttcattcttt gcttcaatca
     501  gttctacaag cattctggct ctgataaagc cttccaacct cctgaatgtc
     551  caatcgtctt gattgggact aacattagca ctaggaataa caatggtctt
     601  tccttggaat gtgaatttcc ctgattttat tgtcttgtaa atgcctgctc
     651  tgtttctaag aattgtgtag ccattattga atgtcatttg gacaccctca
     701  tttgccaaca caaatttctt gaaattgaat ccttcagtct catcagattc
     751  aatcaccaca tccacatctc cgccagacag aagtttctcg atttctgacg
     801  gtttcaccct aacggtagcc at