Sequence of DPV Dasheen mosaic virus

Dasheen mosaic virus isolate DsMV-Amp8 polyprotein gene, partial cds.

ACC No: HQ207535

Dated: 2010-11-04 | Length: 963 | CRC: 829638358

                
ID   HQ207535; SV 2; linear; genomic RNA; STD; VRL; 963 BP.
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AC   HQ207535;
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DT   03-OCT-2010 (Rel. 106, Created)
DT   04-NOV-2010 (Rel. 106, Last updated, Version 2)
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DE   Dasheen mosaic virus isolate DsMV-Amp8 polyprotein gene, partial cds.
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KW   .
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OS   Dasheen mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   "Complete coat protein sequence of the Dasheen mosaic virus isolate
RT   DsMV-Amp8, infecting Amorphophallus paeoniifolius in India";
RL   Unpublished.
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RN   [2]
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   ;
RL   Submitted (01-SEP-2010) to the EMBL/GenBank/DDBJ databases.
RL   Division of Crop Protection, Central Tuber Crops Research Institute,
RL   Sreekariyam, Trivandrum, Kerala 695017, India
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RN   [3]
RC   Sequence update by submitter
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   ;
RL   Submitted (03-NOV-2010) to the EMBL/GenBank/DDBJ databases.
RL   Division of Crop Protection, Central Tuber Crops Research Institute,
RL   Sreekariyam, Trivandrum, Kerala 695017, India
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CC   On Nov 3, 2010 this sequence version replaced gi:307716668.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .963
FT                   /organism="Dasheen mosaic virus"
FT                   /host="Amorphophallus paeoniifolius"
FT                   /isolate="DsMV-Amp8"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /db_xref="taxon:29271"
FT   CDS             <1. .963
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADN88394.2"
FT                   /translation="HDEVVLQADDTVEVGRMLSGMIVSITKAPAIGGGGNITICKPVVN
FT                   NTTNEGGRSPTSLVPKMTTNLVAKSVDPSMKEKGRKLLVDVNVGTSGTFSVPRLNRITK
FT                   KMNLPLVKGKCILNLNHLMEYKPEQRDIFNTRATHTQFEMWYNAVKREYELEDEQMHIV
FT                   MNGFMVWCIDNGTSPDINGAWVMMDGSSQVEYPLKPIVENAKPTLRQIMHHFSDAAEAY
FT                   IELRNAERPYMPRYGLIRNLRDASLARYAFDFYEVNSKTPIRAREAVAQMKAAALSNVT
FT                   TRLFGLDGNVSTSSENIERHMAKDVTPNMHTLLGVSSPQ"
FT   mat_peptide     <1. .21
FT                   /product="NIb"
FT   mat_peptide     22. .960
FT                   /product="coat protein"
FT                   /note="CP"
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SQ   Sequence 963 BP; 297 A; 199 C; 240 G; 227 T; 0 other;

hq207535 Length: 963  04-NOV-2010  Type: N  Check: 3361  ..

       1  catgatgaag ttgtgttgca agctgatgat acagtcgagg ttgggaggat
      51  gctgtcgggc atgatagtta gtatcacaaa agcgccagca ataggcggtg
     101  gtggtaacat cactatctgc aaaccagtcg tgaataacac caccaatgag
     151  ggtggtagat caccgacttc gcttgttcca aagatgacga caaatcttgt
     201  tgccaagagt gtagacccct caatgaagga aaagggaagg aaattactcg
     251  tggatgtcaa cgttggcaca agtggaacat tctcagtgcc tcgcctcaac
     301  agaataacta agaaaatgaa tttaccactt gttaagggaa agtgcatcct
     351  gaatttaaat catttgatgg agtacaaacc ggagcagcgt gacatcttca
     401  acacaagggc cacacacaca caatttgaaa tgtggtacaa tgctgtcaag
     451  agggaatatg aattagaaga tgaacaaatg cacattgtca tgaatgggtt
     501  catggtatgg tgcatagata atggaacatc acccgatatc aacggggctt
     551  gggtgatgat ggacggaagc agtcaagttg aatacccgtt gaaacccata
     601  gtggaaaacg ccaaaccaac cttgcggcag attatgcatc acttttctga
     651  cgcagcagag gcctacattg aattgagaaa cgcggaacgg ccgtacatgc
     701  ctaggtatgg tcttatacgc aacttgcgtg atgcaagctt ggctcgctat
     751  gcgtttgatt tctatgaagt caattcaaaa acgcccattc gagcacgtga
     801  ggctgtagca cagatgaaag ctgcagccct ctcaaacgtt accactaggt
     851  tgtttggttt ggatggtaac gtatcaactt caagcgagaa cattgaaagg
     901  cacatggcga aggacgtcac accgaacatg cacactttac ttggtgtttc
     951  gtctccgcag taa