Sequence of DPV Dasheen mosaic virus

Dasheen mosaic virus isolate DsMV-Amp11 polyprotein gene, partial cds.

ACC No: HQ207538

Dated: 2010-11-04 | Length: 963 | CRC: 290713677

                
ID   HQ207538; SV 2; linear; genomic RNA; STD; VRL; 963 BP.
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AC   HQ207538;
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DT   03-OCT-2010 (Rel. 106, Created)
DT   04-NOV-2010 (Rel. 106, Last updated, Version 2)
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DE   Dasheen mosaic virus isolate DsMV-Amp11 polyprotein gene, partial cds.
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KW   .
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OS   Dasheen mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   "Complete coat protein sequence of the Dasheen mosaic virus isolate
RT   DsMV-Amp11, infecting Amorphophallus paeoniifolius in India";
RL   Unpublished.
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RN   [2]
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   ;
RL   Submitted (01-SEP-2010) to the EMBL/GenBank/DDBJ databases.
RL   Division of Crop Protection, Central Tuber Crops Research Institute,
RL   Sreekariyam, Trivandrum, Kerala 695017, India
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RN   [3]
RC   Sequence update by submitter
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   ;
RL   Submitted (03-NOV-2010) to the EMBL/GenBank/DDBJ databases.
RL   Division of Crop Protection, Central Tuber Crops Research Institute,
RL   Sreekariyam, Trivandrum, Kerala 695017, India
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CC   On Nov 3, 2010 this sequence version replaced gi:307716674.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .963
FT                   /organism="Dasheen mosaic virus"
FT                   /host="Amorphophallus paeoniifolius"
FT                   /isolate="DsMV-Amp11"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /db_xref="taxon:29271"
FT   CDS             <1. .963
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADN88397.2"
FT                   /translation="HDEVVLQADDTVDVGRIVNTTNLVKRKVSREQVGGKFTRTSPPSI
FT                   EGKGTRTPLVPPAKVVITTLLAKKCGTPSVKEKEKEVVRDVNVGTSGVFSVPRLNRITR
FT                   KMNLPFVKGRCILNLNHLMEYKPEQRDIFNTRATHTQFEMWYNAVKREYELEDEQMHIV
FT                   MNGFMVWCIDNGTSPDINGAWVMMDGSSRGEYPLKPIVENAKPTLRQIMHHFSDAAEAY
FT                   IELRNAERPYMPRYGLIRNLRDASLARYAFDFYEVNSKTPIRAREAVAQMKAAALSNVT
FT                   TRLFGLDGNVATASENTESPAEGNATVNGNRPLMVSSPQ"
FT   mat_peptide     <1. .21
FT                   /product="NIb"
FT   mat_peptide     22. .960
FT                   /product="coat protein"
FT                   /note="CP"
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SQ   Sequence 963 BP; 298 A; 202 C; 249 G; 214 T; 0 other;

hq207538 Length: 963  04-NOV-2010  Type: N  Check: 719  ..

       1  catgatgaag ttgtgttgca agctgatgat acagttgatg tcggaaggat
      51  tgttaatacc acaaatttag taaaaaggaa agtgtccagg gaacaggtgg
     101  gggggaaatt cacccgcacc agcccaccat caattgaggg aaagggaacc
     151  aggactccgc ttgtaccgcc agcgaaggta gtaattacaa ccctgttggc
     201  caagaagtgt ggaaccccct cagtgaagga aaaggaaaag gaggttgttc
     251  gtgatgtcaa cgttggtaca agcggagtat tttcagtgcc ccgtcttaat
     301  agaataacaa gaaaaatgaa cctacccttt gttaaaggaa ggtgcatttt
     351  gaatttaaat catttgatgg agtacaaacc agaacagcgt gacatcttca
     401  acacaagagc cacacacaca caatttgaaa tgtggtacaa tgctgtcaag
     451  agggaatatg aattggaaga tgagcaaatg cacatcgtca tgaatgggtt
     501  catggtctgg tgcatagaca atggaacatc acccgatatc aacggggctt
     551  gggtgatgat ggatggaagc agtcgaggtg aatacccgtt gaaacccata
     601  gtggagaatg ccaaaccaac cttgcgtcag attatgcatc acttttctga
     651  cgcagcagag gcctacattg aattgagaaa cgcggaacgg ccgtacatgc
     701  ctaggtacgg ccttatacgc aacttgcgtg atgcaagctt ggctcgttat
     751  gcgtttgact tctacgaagt caattcaaag acgcccattc gagcacgtga
     801  ggcagtggca caaatgaaag ccgcggccct ctcaaacgtt accactaggt
     851  tgtttggttt ggatggtaac gttgcaacag ctagcgaaaa cacagaaagc
     901  cctgcagagg gcaacgccac agttaatggc aacaggccac ttatggtatc
     951  gtctccgcag taa