Sequence of DPV Dasheen mosaic virus

Dasheen mosaic virus isolate DsMV-Amp12 polyprotein gene, partial cds.

ACC No: HQ207539

Dated: 2010-11-04 | Length: 963 | CRC: -677503098

                
ID   HQ207539; SV 2; linear; genomic RNA; STD; VRL; 963 BP.
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AC   HQ207539;
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DT   03-OCT-2010 (Rel. 106, Created)
DT   04-NOV-2010 (Rel. 106, Last updated, Version 2)
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DE   Dasheen mosaic virus isolate DsMV-Amp12 polyprotein gene, partial cds.
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KW   .
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OS   Dasheen mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   "Complete coat protein sequence of the Dasheen mosaic virus isolate
RT   DsMV-Amp12, infecting Amorphophallus paeoniifolius in India";
RL   Unpublished.
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RN   [2]
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   ;
RL   Submitted (01-SEP-2010) to the EMBL/GenBank/DDBJ databases.
RL   Division of Crop Protection, Central Tuber Crops Research Institute,
RL   Sreekariyam, Trivandrum, Kerala 695017, India
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RN   [3]
RC   Sequence update by submitter
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   ;
RL   Submitted (03-NOV-2010) to the EMBL/GenBank/DDBJ databases.
RL   Division of Crop Protection, Central Tuber Crops Research Institute,
RL   Sreekariyam, Trivandrum, Kerala 695017, India
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CC   On Nov 3, 2010 this sequence version replaced gi:307716676.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .963
FT                   /organism="Dasheen mosaic virus"
FT                   /host="Amorphophallus paeoniifolius"
FT                   /isolate="DsMV-Amp12"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /db_xref="taxon:29271"
FT   CDS             <1. .963
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADN88398.2"
FT                   /translation="HDEVVLQADDTVDERATFIGIRASLSAVVATGGGDIPRTSPPSIE
FT                   GTTSEQTPPPPPAVPKVVINPVAKSVDPSSEGKGKEVVRDVNVGTSGVFSVPRLNRITK
FT                   KMNLPLVKGRCILNLNHLMEYKPEQRDIFNTRATHTQFEMWNNAVKREYELNDEPMHTS
FT                   LNGFLAGNIDNGTSPHINGAWVMMMEHQGVEYPLKPIVENAKPTLRQIMHHFSDAAEAY
FT                   IELRNAERPYMPRYGLIRNLRDASLARYAFDFYEVNSKTPIRAREAVAQMKAAALSNVT
FT                   SRLFGLDGNVATASENTERHRARDGPQNMHRPLGVSSPQ"
FT   mat_peptide     <1. .21
FT                   /product="NIb"
FT   mat_peptide     22. .960
FT                   /product="coat protein"
FT                   /note="CP"
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SQ   Sequence 963 BP; 285 A; 215 C; 247 G; 216 T; 0 other;

hq207539 Length: 963  04-NOV-2010  Type: N  Check: 9130  ..

       1  catgatgaag ttgtgttgca agctgatgat acagttgatg aaagggccac
      51  atttattggc atcagggcta gtttatcggc agtggtagcg acaggtggtg
     101  gtgatatccc ccgcaccagc ccaccatcaa ttgagggaac aaccagtgaa
     151  cagactccgc ctccaccacc agcggtaccg aaggtagtaa taaaccctgt
     201  tgccaagagt gtggacccct caagtgaagg aaaaggaaag gaggttgttc
     251  gtgatgtcaa cgttggtaca agcggagtat tttcagtgcc ccgtcttaat
     301  agaataacca agaaaatgaa cctacctctt gttaaaggaa ggtgcatttt
     351  gaatttaaat catttgatgg agtacaaacc agaacagcgt gacatcttca
     401  acacaagagc cacccacacc caatttgaaa tgtggaacaa tgctgtcaag
     451  agggaatatg aattgaatga tgagccaatg cacacatctc tgaatggttt
     501  tctggcgggt aacatcgata atggaacatc accccatatc aacggggctt
     551  gggtgatgat gatggaacac cagggagttg aatacccgtt gaaacccata
     601  gtggagaatg ccaaaccaac cttgcgtcag attatgcatc acttttctga
     651  cgcagcagag gcctacattg aattgagaaa cgcggaacgg ccgtacatgc
     701  ctaggtacgg ccttatacgc aacttgcgtg atgcaagctt ggctcgttat
     751  gcgtttgact tctacgaagt caattcaaag acgcccattc gagcacgtga
     801  ggcagtggca caaatgaaag ccgcggccct ctcaaacgtt accagtaggt
     851  tgtttggttt ggatggtaac gttgcaacag ctagcgaaaa cactgaaagg
     901  catagagcgc gggacggtcc acagaatatg cacaggccac tgggggtatc
     951  gtctccgcag taa