Sequence of DPV Dasheen mosaic virus

Dasheen mosaic virus isolate DsMV-Amp13 polyprotein gene, partial cds.

ACC No: HQ207540

Dated: 2010-11-04 | Length: 963 | CRC: -1399923462

                
ID   HQ207540; SV 2; linear; genomic RNA; STD; VRL; 963 BP.
XX
AC   HQ207540;
XX
DT   03-OCT-2010 (Rel. 106, Created)
DT   04-NOV-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Dasheen mosaic virus isolate DsMV-Amp13 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Dasheen mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   "Complete coat protein sequence of the Dasheen mosaic virus isolate
RT   DsMV-Amp13, infecting Amorphophallus paeoniifolius in India";
RL   Unpublished.
XX
RN   [2]
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   ;
RL   Submitted (01-SEP-2010) to the EMBL/GenBank/DDBJ databases.
RL   Division of Crop Protection, Central Tuber Crops Research Institute,
RL   Sreekariyam, Trivandrum, Kerala 695017, India
XX
RN   [3]
RC   Sequence update by submitter
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   ;
RL   Submitted (03-NOV-2010) to the EMBL/GenBank/DDBJ databases.
RL   Division of Crop Protection, Central Tuber Crops Research Institute,
RL   Sreekariyam, Trivandrum, Kerala 695017, India
XX
CC   On Nov 3, 2010 this sequence version replaced gi:307716678.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .963
FT                   /organism="Dasheen mosaic virus"
FT                   /host="Amorphophallus paeoniifolius"
FT                   /isolate="DsMV-Amp13"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /db_xref="taxon:29271"
FT   CDS             <1. .963
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADN88399.2"
FT                   /translation="HDEVVLQADDTVDVGKIINTTKVTETKTPAAECTGIGTGPSLSGR
FT                   VAPCGDPPPPPPVVPKVTETPANRPVAPTVSEKGKEVVKDVNAGTSGTYSVPRLNRITH
FT                   NMNLPLVKGKCILNLNHLIEYKPEQRDIFNTRATHTQFEVWYNAVKREYELEDEQMHIV
FT                   MNGFMVWCIDNGTSPDINGAWVMMDGNDQSEYPLKPIVDDAKPTLRQIMHHFSDAAKAY
FT                   IELKNAEKPYMPRYGLIRNLRDASLARYAFDFYEVNSKTPVYTREAVAQMKAAALSNVT
FT                   TRLVGLDGNVSISTPKPKGPLQRTSHRTCPGHRLVAGPQ"
FT   mat_peptide     <1. .21
FT                   /product="NIb"
FT   mat_peptide     22. .960
FT                   /product="coat protein"
FT                   /note="CP"
XX
SQ   Sequence 963 BP; 293 A; 214 C; 235 G; 221 T; 0 other;

hq207540 Length: 963  04-NOV-2010  Type: N  Check: 767  ..

       1  catgatgaag ttgtgttgca agctgatgat acagttgatg tgggaaagat
      51  tattaatacc acaaaagtaa ctgaaacgaa gactcctgca gcagagtgca
     101  caggcattgg caccgggcct agtttatctg gcagggttgc accatgtggt
     151  gaccctcccc cgcccccacc ggtggtgcct aaagtgacag aaactcccgc
     201  taatagaccc gtagccccta ctgtgagtga gaaaggaaag gaagttgtca
     251  aagatgttaa cgctggcacc agcggcacat actctgtacc tcgattaaac
     301  agaatcacac ataatatgaa tttgcctttg gttaaaggca agtgcattct
     351  gaatttaaac catttaatcg agtacaaacc agaacagcgt gacatcttca
     401  acaccagagc cacccacaca cagtttgagg tctggtacaa tgctgtcaaa
     451  agggagtatg aacttgagga tgagcagatg cacatagtaa tgaatggttt
     501  catggtttgg tgcatcgata atggaacatc acctgatatt aacggggctt
     551  gggtgatgat ggatggaaac gatcaaagtg agtacccgtt aaaaccaatt
     601  gttgatgatg caaaaccaac cttgcgtcag ataatgcatc acttctctga
     651  cgcggcaaag gcatatattg aattgaaaaa tgcggagaag ccgtacatgc
     701  ctaggtatgg tcttattcgc aacttacgtg atgcaagtct cgcccggtat
     751  gcttttgact tttatgaggt caactctaaa acaccggtgt acacaagaga
     801  ggcggtcgcg caaatgaagg ccgccgcgct ctctaacgtt accacaaggt
     851  tggttggttt agatggtaac gtatcaattt caacgccaaa accgaaaggc
     901  ccactgcaaa ggacgtcaca cagaacatgc ccaggccaca ggttggtagc
     951  aggaccgcag taa