Sequence of DPV Dasheen mosaic virus

Dasheen mosaic virus isolate DsMV-Xan1 polyprotein gene, partial cds.

ACC No: HQ207542

Dated: 2010-11-04 | Length: 963 | CRC: 172651881

                
ID   HQ207542; SV 2; linear; genomic RNA; STD; VRL; 963 BP.
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AC   HQ207542;
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DT   03-OCT-2010 (Rel. 106, Created)
DT   04-NOV-2010 (Rel. 106, Last updated, Version 2)
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DE   Dasheen mosaic virus isolate DsMV-Xan1 polyprotein gene, partial cds.
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KW   .
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OS   Dasheen mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   "Complete coat protein sequence of the Dasheen mosaic virus isolate
RT   DsMV-Xan-1, infecting Xanthosoma in India";
RL   Unpublished.
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RN   [2]
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   ;
RL   Submitted (02-SEP-2010) to the EMBL/GenBank/DDBJ databases.
RL   Division of Crop Protection, Central Tuber Crops Research Institute,
RL   Sreekariyam, Trivandrum, Kerala 695017, India
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RN   [3]
RC   Sequence update by submitter
RP   1-963
RA   Binoy B., Hegde V., Makeshkumar T., Jeeva M.L.;
RT   ;
RL   Submitted (03-NOV-2010) to the EMBL/GenBank/DDBJ databases.
RL   Division of Crop Protection, Central Tuber Crops Research Institute,
RL   Sreekariyam, Trivandrum, Kerala 695017, India
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CC   On Nov 3, 2010 this sequence version replaced gi:307716682.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .963
FT                   /organism="Dasheen mosaic virus"
FT                   /host="Xanthosoma sagittifolium"
FT                   /isolate="DsMV-Xan1"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /db_xref="taxon:29271"
FT   CDS             <1. .963
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADN88401.2"
FT                   /translation="HDEVVLQADDTVDTGPFINTTTVIGRETLATCGGNNTNNTTPSVE
FT                   GTTSEQTPPPPPAVPKVLINPVAKSVDPSVKEKERRVVRDVNVGTSGVFSVPRLNRITK
FT                   KMNLPLVKGRCILNLNHLMEYKPKQRDILNSRSTHTQFDLWYNAVKREYELQDDHMHIV
FT                   MNGFMVWCIYNGTSPDINGAWVMMDGISQVEYPWKPIMENAPPILRPSMLMFSDATKAY
FT                   IEMTNGKMQYLPRYDLIRNLREATLARYAFDFYEVNSKTPIRAREAVAQMKAAALSNVT
FT                   TRLFGLDGNVATASENTERHTERNRPQNMQATGMVSSPQ"
FT   mat_peptide     <1. .21
FT                   /product="NIb"
FT   mat_peptide     22. .960
FT                   /product="coat protein"
FT                   /note="CP"
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SQ   Sequence 963 BP; 304 A; 210 C; 227 G; 222 T; 0 other;

hq207542 Length: 963  04-NOV-2010  Type: N  Check: 8956  ..

       1  catgatgaag ttgtgttgca agctgatgat acagttgata caggcccatt
      51  tattaatacc acaacagtta ttggcaggga gactctggcg acttgtggtg
     101  gaaacaacac caacaacacc acaccatcag ttgagggaac aaccagtgaa
     151  cagactccgc ctccaccacc agcggtaccg aaagtactaa taaaccctgt
     201  tgccaagagt gtggacccct cagtgaagga aaaggaaagg agggttgttc
     251  gtgatgtcaa cgttggtaca agcggagtat tttcagtgcc ccgtcttaat
     301  agaataacca agaaaatgaa cctacctctt gttaaaggaa ggtgcatttt
     351  gaatttgaat catttgatgg agtacaaacc aaaacagcgt gacatcttga
     401  actcaagatc cacacacaca caatttgatt tgtggtacaa tgctgtcaag
     451  agggaatatg aattgcaaga tgaccacatg cacatcgtca tgaatgggtt
     501  catggtctgg tgcatataca atggaacatc acccgatatc aacggggctt
     551  gggtgatgat ggatggaatc agtcaagttg aatacccgtg gaaacccata
     601  atggaaaatg ccccaccaat cttgcgtcct agtatgctta tgttttctga
     651  cgcaacaaag gcctacattg aaatgacaaa cgggaaaatg caatacctgc
     701  ctaggtacga tcttatacgc aatttgcgtg aagcaacatt ggctcgttat
     751  gcgtttgact tttacgaagt caattcaaag acgcccattc gagcacgtga
     801  ggcagtggca caaatgaaag ccgcggccct ctcaaacgtt accactaggt
     851  tgtttggttt ggatggtaac gttgcaacag ctagcgaaaa cactgaaagg
     901  cacacagaga ggaacaggcc acagaacatg caggccacag gtatggtatc
     951  gtctccgcag taa