Sequence of DPV Dahlia mosaic virus

Dahlia mosaic virus isolate D10 movement protein gene, complete cds.

ACC No: HQ261756

Dated: 2011-11-15 | Length: 990 | CRC: 1213636074

                
ID   HQ261756; SV 1; linear; genomic DNA; STD; VRL; 990 BP.
XX
AC   HQ261756;
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DT   15-MAR-2011 (Rel. 108, Created)
DT   15-NOV-2011 (Rel. 110, Last updated, Version 3)
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DE   Dahlia mosaic virus isolate D10 movement protein gene, complete cds.
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KW   .
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OS   Dahlia mosaic virus
OC   Viruses; Retro-transcribing viruses; Caulimoviridae; Caulimovirus.
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RN   [1]
RP   1-990
RX   PUBMED; 21837417.
RA   Eid S., Almeyda C.V., Saar D.E., Druffel K.L., Pappu H.R.;
RT   "Genomic characterization of pararetroviral sequences in wild Dahlia spp.
RT   in natural habitats";
RL   Arch. Virol. 156(11):2079-2084(2011).
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RN   [2]
RP   1-990
RA   Eid S., Almeyda C., Saar D., Druffel K., Pappu H.;
RT   ;
RL   Submitted (16-SEP-2010) to the INSDC.
RL   Plant Pathology, Washington State University, 100 Dairy Rd., Pullman, WA
RL   99164, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .990
FT                   /organism="Dahlia mosaic virus"
FT                   /host="Dahlia coccinea"
FT                   /isolate="D10"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico"
FT                   /collection_date="Aug-2006"
FT                   /db_xref="taxon:213888"
FT   CDS             1. .990
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:F2WW29"
FT                   /db_xref="InterPro:IPR001022"
FT                   /db_xref="UniProtKB/TrEMBL:F2WW29"
FT                   /protein_id="ADZ44588.1"
FT                   /translation="MDRNDLFDLNKDDSEESFNQEITEVINFSENENGFASDYMINSDH
FT                   LEKIMKLKLKLDTKQVFNQPNSLQRLVSKTFSRKNNIFYCFNTEKLSVDIKDTTREVYL
FT                   PLLTKGEIARRLLTIKPELRKTMNMVHIGAVKILLNEQFRDGINFPIKMALVDNRIINR
FT                   QDALLGTVQGNLAYGKFMFAVYPKFALHRDSKDFEKTLSFIHQCERTDLMEPGNKVFTI
FT                   NYLISYALTNSTHSIKYKEKESITIEDVFSEIGTVEESKFAEPSQLQENWAINIAREKQ
FT                   TLGYQPRNSITGIPLQIRESSNTEKQLIRSISEKVDMYGEILREMIGK"
XX
SQ   Sequence 990 BP; 400 A; 149 C; 164 G; 277 T; 0 other;

hq261756 Length: 990  15-NOV-2011  Type: N  Check: 2478  ..

       1  atggatcgta atgatttatt tgatttaaat aaagatgatt cggaagaatc
      51  attcaaccaa gaaattactg aagtaataaa cttcagtgaa aacgaaaatg
     101  gttttgcatc agattacatg attaattctg atcacctaga aaaaattatg
     151  aagcttaaat taaaacttga cacaaaacaa gtttttaatc agcctaatag
     201  tttacagaga ttagtttcaa aaactttctc tagaaaaaat aatatctttt
     251  attgctttaa tactgaaaaa ttgtcagtag atataaaaga tacaacacgt
     301  gaagtgtatt taccactcct aacaaaagga gaaatagcca gaagacttct
     351  gactattaaa ccagaattaa gaaaaaccat gaatatggtg cacatcggag
     401  cagtaaaaat ccttctgaat gaacagttca gagatggaat taacttcccg
     451  ataaaaatgg ctttagttga taacagaatt atcaacaggc aagacgctct
     501  actaggcaca gttcaaggaa atttagcata cggtaaattt atgtttgctg
     551  tttatcctaa atttgcatta catcgagatt caaaagattt cgaaaaaacc
     601  ctaagtttca tacatcagtg cgaaaggacc gacctcatgg aaccaggtaa
     651  caaagttttt acgattaatt atttaatttc gtatgctttg acaaatagta
     701  ctcattcaat aaagtataaa gaaaaagaga gtataactat tgaagatgta
     751  ttctcagaaa taggaactgt cgaagaaagt aagttcgctg aaccttctca
     801  gttacaggaa aattgggcga ttaatatcgc tcgagaaaaa caaactctag
     851  gatatcaacc tagaaatagt attacaggaa tccctttaca aataagagaa
     901  tccagtaaca cagaaaaaca acttattcgg tctatatccg aaaaagtaga
     951  catgtatgga gaaatcctta gagaaatgat tgggaaatga