Sequence of DPV Dahlia mosaic virus
Dahlia mosaic virus isolate D10 polyprotein gene, complete cds.
ACC No: HQ261758
Dated: 2011-11-15 | Length: 2421 | CRC: 1777342918
ID HQ261758; SV 1; linear; genomic DNA; STD; VRL; 2421 BP.
XX
AC HQ261758;
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DT 15-MAR-2011 (Rel. 108, Created)
DT 15-NOV-2011 (Rel. 110, Last updated, Version 3)
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DE Dahlia mosaic virus isolate D10 polyprotein gene, complete cds.
XX
KW .
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OS Dahlia mosaic virus
OC Viruses; Retro-transcribing viruses; Caulimoviridae; Caulimovirus.
XX
RN [1]
RP 1-2421
RX PUBMED; 21837417.
RA Eid S., Almeyda C.V., Saar D.E., Druffel K.L., Pappu H.R.;
RT "Genomic characterization of pararetroviral sequences in wild Dahlia spp.
RT in natural habitats";
RL Arch. Virol. 156(11):2079-2084(2011).
XX
RN [2]
RP 1-2421
RA Eid S., Almeyda C., Saar D., Druffel K., Pappu H.;
RT ;
RL Submitted (16-SEP-2010) to the INSDC.
RL Plant Pathology, Washington State University, 100 Dairy Rd., Pullman, WA
RL 99164, USA
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FH Key Location/Qualifiers
FH
FT source 1. .2421
FT /organism="Dahlia mosaic virus"
FT /host="Dahlia coccinea"
FT /isolate="D10"
FT /mol_type="genomic DNA"
FT /country="Mexico"
FT /collection_date="Aug-2006"
FT /db_xref="taxon:213888"
FT CDS 1. .2421
FT /codon_start=1
FT /product="polyprotein"
FT /note="ORF5"
FT /db_xref="GOA:F2WW31"
FT /db_xref="InterPro:IPR000477"
FT /db_xref="InterPro:IPR000588"
FT /db_xref="UniProtKB/TrEMBL:F2WW31"
FT /protein_id="ADZ44590.1"
FT /translation="MSSILDRLDKIFFDLLEIRPIEQIRELVQLMSLTEQECEQQFSEN
FT KDLRDKYLSEDKFLENKEKVSAINELKTKEENSLEEKHYANKCPNKQESPEQVKLISKA
FT ETEGYYPTENIFNDYMQVYSLEEHEPLTDSDTSSDSSSSHKMNMEKKDNNDQIHYCQNE
FT LVYSNITNPNSIYIKGNFFFKGYKTITLHCYVDTGASLCLASRHVIPEDLWENTPKDIK
FT VTIANQETTKLDKVCRNLIVYFSGEPFPIPTIYQQESGIDLLLGNNFCQLYGPFTQWID
FT RISFHLNQEMILIKKITKAFQIGKTGFLESMKKDSKTKQTPGTNITQEVIKPERFFLEI
FT KKYQKIEELLEKVCSENPIDPEKSKCWMNASIELIDPKAVIRVKPMKYSPQDREEFGKQ
FT IKELLELKLIIPSKSPHMSPAFLVENEAEKRRRKKRMVVNYKAINAATKGDSHNLPCMQ
FT ELLTLLRGKTYFSSFDCKSGFWQVLLDEESQLLTAFTCPNGHYQWKVVPFGLKQAPSIF
FT QRHMQNALRGLENYCTVYVDGIIVFSDSEEKYYFHVLSILKTIEKYGIILSKKKANLFK
FT TKINFLGLEIDQGTHCPQKHILENLHKFPDTLEDKKHLQRFLGVLTYAESYIPKLAELR
FT RPLQVKLKKDYVWEWKQSDTNYIKKIKKNLTSFPKLYLPKEKEFPIIETDASNDFWGGV
FT LKAKTADKEAVCRYTSGSFKTAEKNYHSNEKKLLAVKNTISKFSIYLTPVKFLVRTDNR
FT NFTYFLKTKISGDNKQGRLIRWQMWFSRYSFDIEHLEGSKNVLADCLTRDFQN"
XX
SQ Sequence 2421 BP; 956 A; 398 C; 382 G; 685 T; 0 other;
hq261758 Length: 2421 15-NOV-2011 Type: N Check: 1099 ..
1 atgagttcta tcttagacag attagacaaa atcttttttg atcttttgga
51 aatccgtcca attgaacaaa taagagaact cgttcaactc atgtccttaa
101 cagaacaaga gtgtgaacaa caattttctg aaaataaaga tttgagagat
151 aaatatcttt cagaagacaa atttttagaa aataaagaaa aagtttctgc
201 aataaatgaa cttaaaacta aagaagaaaa ctctttagaa gaaaaacact
251 atgccaacaa atgtcctaac aaacaagaat ctccggaaca ggtaaaactg
301 atttctaaag cagaaactga aggatattat cctacagaaa atatttttaa
351 tgactatatg caggtatact cattagaaga acacgaaccc ttgactgatt
401 ctgatactag ctcagacagc tcgtcatccc acaaaatgaa tatggagaaa
451 aaagataata atgaccaaat tcattattgt caaaatgaat tagtttattc
501 caatataact aatccaaact caatttatat caaaggaaat ttttttttta
551 aaggatataa aacaataact ctacattgtt atgtagatac aggagcaagt
601 ctttgtcttg caagcagaca tgtcattcct gaggatctat gggaaaacac
651 tcccaaagat ataaaagtaa caattgcaaa tcaggagaca acaaaattag
701 acaaggtttg tagaaatctt attgtctatt tttcaggaga accatttcct
751 attcccacta tctaccaaca agaaagtggt atagatttac tcctcggaaa
801 taacttttgt caactatatg ggccatttac ccaatggatt gacagaatat
851 cttttcatct taatcaagaa atgattttga tcaaaaagat aacaaaagct
901 tttcaaattg gaaaaactgg ttttcttgaa tctatgaaaa aagattcaaa
951 aacaaaacaa acccctggta ctaacataac ccaagaagtt ataaaaccag
1001 aaagattttt tcttgaaata aagaaatatc aaaaaattga agagctactt
1051 gaaaaggtat gctctgaaaa ccctattgat ccagaaaaat ccaaatgttg
1101 gatgaatgcc tcaatagaat tgatagatcc taaagctgta attagggtaa
1151 aacctatgaa atatagccct caagatcgtg aagaatttgg taaacaaatt
1201 aaagaattac ttgagttaaa attaattatt ccaagtaaat cgcctcacat
1251 gtctccagct tttcttgtag aaaatgaagc agagaaaaga agaagaaaaa
1301 agcgcatggt tgtcaattac aaagcaatca atgcagccac taaaggagat
1351 agccataatc ttccctgtat gcaggaacta ttaaccctct taagaggaaa
1401 aacttatttt tccagtttcg actgcaaaag tggtttttgg caggtactgc
1451 ttgatgaaga atcccagttg ctaacggcat tcacatgtcc gaatggtcac
1501 tatcaatgga aggtagtccc ttttggacta aaacaggcac ccagcatatt
1551 tcaaagacat atgcaaaatg ccttaagagg tttagaaaat tattgcaccg
1601 tctacgtgga tggcattata gttttctcag actctgaaga aaaatattac
1651 tttcatgttc tttcgatctt aaaaacgatt gaaaaatatg gaattatttt
1701 atcaaaaaaa aaggcaaatc tttttaaaac aaagataaac tttttaggtc
1751 ttgaaataga tcaagggact cattgtccac aaaaacatat cttggaaaat
1801 ttacataaat ttccagatac tttagaagat aaaaaacatc ttcaaagatt
1851 tctaggtgtt ctaacctatg cagaaagcta cattcctaag cttgcggagc
1901 tcaggagacc cttacaggta aagctaaaaa aggactacgt atgggaatgg
1951 aaacaatccg atacgaacta tattaagaag ataaagaaaa atttaacaag
2001 ttttccaaaa ctttatcttc caaaagaaaa agaatttcct attatagaaa
2051 cagatgcttc caatgatttt tggggaggcg ttctaaaagc aaaaactgct
2101 gacaaagaag cagtgtgccg atacacttct ggtagtttca aaacagcaga
2151 aaagaattac cacagtaatg aaaaaaaatt acttgcggta aaaaacacta
2201 tttccaaatt ctccatttat cttactccgg taaaattctt ggttagaacg
2251 gataatagaa attttactta tttcctaaaa acaaaaattt caggagataa
2301 caaacaaggt cgtcttatca gatggcaaat gtggttttcc agatactctt
2351 ttgatattga gcatcttgaa ggatcaaaaa atgtgttggc tgactgccta
2401 acacgagatt ttcaaaatta a