Sequence of DPV Soybean mosaic virus
Soybean mosaic virus strain 4424/CHN/2004 coat protein gene, partial cds.
ACC No: HQ396722
Dated: 2011-01-28 | Length: 1343 | CRC: -2034544231
ID HQ396722; SV 1; linear; genomic RNA; STD; VRL; 1343 BP.
XX
AC HQ396722;
XX
DT 10-JAN-2011 (Rel. 107, Created)
DT 28-JAN-2011 (Rel. 107, Last updated, Version 2)
XX
DE Soybean mosaic virus strain 4424/CHN/2004 coat protein gene, partial cds.
XX
KW .
XX
OS Soybean mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1343
RA Yang Y., Zhi H.;
RT "Evidences from soybean show the origin of Watermelon mosaic virus (WMV)";
RL Unpublished.
XX
RN [2]
RP 1-1343
RA Yang Y., Zhi H.;
RT ;
RL Submitted (12-OCT-2010) to the EMBL/GenBank/DDBJ databases.
RL Soybean Research Institute, National Center for Soybean Improvement,
RL National Key Laboratory for Crop Genetics and Germplasm Enhancement,
RL Nanjing Agricultural University, 1 Weigang, Nanjing, Jiangsu 210095, China
XX
FH Key Location/Qualifiers
FH
FT source 1. .1343
FT /organism="Soybean mosaic virus"
FT /host="soybean"
FT /lab_host="soybean"
FT /strain="4424/CHN/2004"
FT /serotype="SMV"
FT /mol_type="genomic RNA"
FT /country="China"
FT /collection_date="2004"
FT /note="PCR_primers=fwd_seq: gtgggacaggagcaaaga"
FT /db_xref="taxon:12222"
FT CDS <1. .1090
FT /codon_start=2
FT /product="coat protein"
FT /protein_id="ADU54182.1"
FT /translation="WDRSKELMHRTEAICAAMIEAWGYTELLQEIRKFYLWLLNKDEFK
FT ELASSGKAPYIAETALRKLYTDVNAQTSELQRYLEVLDFNHADDCCESVSLQSGKEKEG
FT DMDAGNDPKKSTSSSKGAGTSSKDVNVGSKGKVVPRLQKITRKMNLPMVEGKIILSLDH
FT LLEYKPNQVDLFNTRATRTQFEAWYNAVKDEYELDDEQMGVVMNGFMVWCIDNGTSPDA
FT NGVWVMMDGEEQIEYPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNSESPYMPRYGLL
FT RNLRDRELARYAFDFYEVTSKTPNRAREAIAQMKAAALSGVNNKLFGLDGNISTNSENT
FT ERHTARDVNQNMHTLLGMGPQQ"
XX
SQ Sequence 1343 BP; 416 A; 225 C; 339 G; 363 T; 0 other;
hq396722 Length: 1343 28-JAN-2011 Type: N Check: 2917 ..
1 gtgggacagg agcaaagagc tcatgcatcg cactgaagcg atatgcgcag
51 caatgattga ggcatgggga tacactgaat tgctgcaaga gatccgcaaa
101 ttttatttgt ggctcctaaa caaggatgag tttaaggagc ttgcttcgtc
151 tggaaaagca ccatatattg cagagacagc tttgagaaag ctatacacag
201 atgtcaatgc tcagacaagt gagctacaaa gatatcttga agtgctggat
251 ttcaatcatg ctgatgactg ttgtgaatca gtttctttgc aatcaggcaa
301 ggagaaagaa ggagacatgg atgcaggcaa cgatccaaag aagagtacca
351 gcagtagcaa aggagctggt acgagcagta aagatgtaaa tgttggatca
401 aaaggaaagg tggttccgcg tttgcagaag attacaagaa agatgaatct
451 tccaatggtt gaagggaaga tcattcttag cttggaccac ttgcttgagt
501 ataagcctaa tcaggttgat ttattcaaca ctcgagcaac aaggacacag
551 tttgaggcgt ggtacaatgc agttaaagat gaatatgagc ttgatgatga
601 gcagatgggt gtggtcatga atggtttcat ggtttggtgt attgataatg
651 gcacatctcc agatgccaat ggcgtgtggg tgatgatgga tggagaggaa
701 cagattgaat atccgctgaa acccattgtt gaaaatgcaa aaccaacttt
751 aaggcaaatc atgcatcatt tttcagatgc agcagaagct tacattgaga
801 tgaggaattc tgaaagtccg tatatgccta gatatggact actaaggaat
851 ttgagagata gagaactggc ccgctatgct tttgacttct atgaggtcac
901 ttctaaaaca ccaaacaggg caagggaagc aatagcgcag atgaaggctg
951 cagctctctc gggagttaac aacaagttgt ttggacttga tgggaatatc
1001 tcaaccaact ccgaaaatac tgaaaggcac actgcaaggg atgtgaatca
1051 aaacatgcac actcttctgg gcatgggccc acagcagtaa agaccaagta
1101 aattggtcac agttatcatt tcgggtcgct ttatagttta ctataatata
1151 gtaattgcac tttctttgag tatagtgtga ttgcatcacc aaataatact
1201 tttgtttagt gtggttttaa ccacctcagt gtgttttatt ttatagttta
1251 tgaatggcag ggagaaccat tgtgttactg gagccctttg aagagtgatt
1301 ttatcatgtt tagtggccga ggtacggcaa tgtttgttgt cct