Sequence of DPV Tomato leaf curl Togo betasatellite

Tomato leaf curl Togo betasatellite-[Togo:2006], complete sequence.

ACC No: HQ586965

Dated: 2012-02-24 | Length: 1388 | CRC: -13171240

                
ID   HQ586965; SV 1; circular; genomic DNA; STD; VRL; 1388 BP.
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AC   HQ586965;
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DT   30-NOV-2010 (Rel. 107, Created)
DT   24-FEB-2012 (Rel. 111, Last updated, Version 3)
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DE   Tomato leaf curl Togo betasatellite-[Togo:2006], complete sequence.
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KW   .
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OS   Tomato leaf curl Togo betasatellite-[Togo:2006]
OC   Viruses; Satellites; Satellite Nucleic Acids;
OC   Single stranded DNA satellites; Betasatellites.
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RN   [1]
RP   1-1388
RX   PUBMED; 22057578.
RA   Kon T., Gilbertson R.L.;
RT   "Two genetically related begomoviruses causing tomato leaf curl disease in
RT   Togo and Nigeria differ in virulence and host range but do not require a
RT   betasatellite for induction of disease symptoms";
RL   Arch. Virol. 157(1):107-120(2012).
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RN   [2]
RP   1-1388
RA   Kon T., Gilbertson R.L.;
RT   ;
RL   Submitted (05-NOV-2010) to the INSDC.
RL   Department of Plant Pathology, University of California-Davis, One Shields
RL   Avenue, Davis, CA 95616, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1388
FT                   /organism="Tomato leaf curl Togo betasatellite-[Togo:2006]"
FT                   /host="tomato"
FT                   /mol_type="genomic DNA"
FT                   /country="Togo"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:929051"
FT   gene            complement(195. .548)
FT                   /gene="BetaC1"
FT   CDS             complement(195. .548)
FT                   /codon_start=1
FT                   /gene="BetaC1"
FT                   /product="BetaC1"
FT                   /db_xref="InterPro:IPR018583"
FT                   /db_xref="UniProtKB/TrEMBL:E5Q3H4"
FT                   /protein_id="ADQ92354.1"
FT                   /translation="MTITYKNNRGVTFKINVYLQEARINCDIQVTANKEAYVSTSTYNI
FT                   PYSFEEVIIPFDFNGTEEQIANAIAQIFNGLHYREMRQEDIVEAIDMIMAENENVLGIQ
FT                   IIEPHRVKIKISV"
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SQ   Sequence 1388 BP; 434 A; 270 C; 254 G; 430 T; 0 other;

hq586965 Length: 1388  24-FEB-2012  Type: N  Check: 8687  ..

       1  accgatggcg agcggtgcct ctggtgtaca tgtgggtccc actttagtca
      51  aagtggaaga cgttcaattt tgggcctaat tgggccttac tattcaatcc
     101  attttcgtag aaaatttgag cccatgttca ttacgatagt gtgggttatt
     151  tattaatttc ataatattat tgccaaaatt aattatgcat tacattacac
     201  ggagattttt attttaaccc tatgcggttc tataatttgt attccaagta
     251  cattctcatt ttctgccata atcatatcaa ttgcttccac tatgtcttcc
     301  tgcctcattt ctcggtagtg gagtccattg aaaatttgcg ctatggcgtt
     351  agcaatttgt tcctctgtgc cgttgaagtc gaatggaatg atgacttctt
     401  cgaatgagta tggaatgtta tatgtagaag tactcacata tgcttccttg
     451  tttgctgtca cctgtatatc acaattgata cgcgcttcct gaagatatac
     501  atttatttta aatgtcaccc ctctgttgtt cttgtatgtg atagtcatgt
     551  ttgtatgata ttgccatttg tctaagtcaa tttatagagc ttagatcgaa
     601  atatctaacc tatataagat ggctatttag acacgtatta cctctgattg
     651  ccgttgaagg tgcctgtcta ttattgtatt atactgacta gtcatgaact
     701  tccactatgc tttgtggaca aagcatggtc caagaaagaa aaaaaaacaa
     751  tatgcattgt catcaatgca tgaacaaaaa aaaaagaaaa acacatcaca
     801  caaacaatca taacttatga aaaaatggta gcgcagcgga aaaaaaccac
     851  caactaacac aatcaaaacg agaaataatt cgagacgaat tatgatcaaa
     901  aaaaagaaaa gaaaaaaaat taaatacttt aatttattaa agtatgtctt
     951  agactgtata ggtgacgtaa atgtaaccgt atatttgtac gtatacatat
    1001  acgtacaaat aggttacata cagtaactaa cacgtgctag tcgcgtgtta
    1051  gtttaattaa ttacatttat gccattacac cccttactat atattgtact
    1101  ccattactcc aataccccaa ttggcaccgg tgcctattgg tgccaagaga
    1151  gagaaaatgg ttggtaaaag tctaaaatac ccctgtaaag cagagataac
    1201  aggcgcgtga gatgcgctgc aaaagttaag tttctctccc ctaaattccg
    1251  atcagaagct cattccggcc gataccggtg tcaatttgcg acacgcgcgg
    1301  cggtgtgtac ccctgggagg gtcgaaacca ctacgctacg cagcagcctt
    1351  agctacgccg gagcttagct cgccatcgtt ataatatt