Sequence of DPV Pepper yellow mosaic virus

Pepper yellow mosaic virus isolate 32A coat protein gene, partial cds.

ACC No: HQ594519

Dated: 2011-11-22 | Length: 836 | CRC: -1074905846

                
ID   HQ594519; SV 1; linear; genomic RNA; STD; VRL; 836 BP.
XX
AC   HQ594519;
XX
DT   27-MAY-2011 (Rel. 109, Created)
DT   22-NOV-2011 (Rel. 110, Last updated, Version 2)
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DE   Pepper yellow mosaic virus isolate 32A coat protein gene, partial cds.
XX
KW   .
XX
OS   Pepper yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-836
RA   Moura M.F., Mituti T., Marubayashi J.M., Gioria R., Kobori R.F.,
RA   Pavan M.A., da Silva N., Krause-Sakate R.;
RT   "A classification of Pepper yellow mosaic virus isolates into pathotypes";
RL   Eur. J. Plant Pathol. 131(4):549-552(2011).
XX
RN   [2]
RP   1-836
RA   Moura M.F., Mituti T., Marubayashi J.M., Gioria R., Kobori R., Pavan M.A.,
RA   Krause-Sakate R.;
RT   ;
RL   Submitted (04-NOV-2010) to the INSDC.
RL   Plant Protection, UNESP/FCA, Rua Jose Barbosa de Barros, 1780, Botucatu, SP
RL   18610-307, Brazil
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FH   Key             Location/Qualifiers
FH
FT   source          1. .836
FT                   /organism="Pepper yellow mosaic virus"
FT                   /host="Capsicum sp."
FT                   /isolate="32A"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /db_xref="taxon:160358"
FT   CDS             <1. .>836
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F6KS81"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F6KS81"
FT                   /protein_id="AEF59029.1"
FT                   /translation="ADEKLAVLDAAEEDKKKKARNEKPTEVPSLKGEEKEVSTARDNDV
FT                   NTGTTGTFTVPRIKAITGKMRMPKVGGTTILNLDHLLTYTPQQIDISNTRSTRNQFDNW
FT                   YAAVKNVYDVGDTEMQTIMNGLMVWCIENGTSPNINGVWTMMDGEEQVEYPLKPVIENS
FT                   KPTLRQIMAHFSDVAEAYIEMRNKKEPYMPRYGLIRNLRDLSLARYAFDFYEVTSRTPT
FT                   RAREAHIQMKAAALKSAQTRMFGLDGGISTQEENTERHTTEDVSPNMHTLLGVKNM"
XX
SQ   Sequence 836 BP; 278 A; 158 C; 209 G; 191 T; 0 other;

hq594519 Length: 836  22-NOV-2011  Type: N  Check: 994  ..

       1  gctgatgaga agctagcagt gttggatgca gctgaggagg ataaaaagaa
      51  gaaggcaaga aatgaaaagc caactgaagt gcccagtttg aagggagagg
     101  aaaaggaagt gtctacagct agagacaatg atgtaaatac cggaacaact
     151  ggtactttta ctgtgccgag gataaaggca ataacgggta agatgaggat
     201  gccgaaagta ggcggcacca cgattttaaa tctggatcac ttactcacat
     251  acacacctca acaaatagac atttcaaaca caagatctac gcgcaaccag
     301  tttgataatt ggtatgctgc agttaaaaat gtgtatgatg ttggggatac
     351  tgagatgcaa accattatga atggattaat ggtttggtgc attgagaatg
     401  gaacttcacc aaacataaat ggcgtctgga ccatgatgga tggggaggag
     451  caagttgaat atccattaaa acccgtgatc gagaattcga agcctacttt
     501  acgtcagatc atggctcatt tctctgatgt cgctgaggca tatattgaaa
     551  tgaggaacaa gaaggaacca tacatgccac gctatggtct aatccggaat
     601  ttgcgagacc ttagtcttgc acgatacgct tttgacttct atgaagtcac
     651  atcgcgcacc cctacaaggg cacgtgaagc ccacatacag atgaaggcag
     701  cggctttaaa atctgctcag acacgtatgt ttggacttga cggtggcatt
     751  agtacacaag aggaaaacac tgagaggcac accacagaag atgtgagccc
     801  caacatgcat actttacttg gggtgaagaa tatgta