Sequence of DPV Armero virus
Armero virus strain Co Ar 170396 segment M, complete sequence.
ACC No: HQ661806
Dated: 2011-05-27 | Length: 4157 | CRC: 76415061
ID HQ661806; SV 1; linear; genomic RNA; STD; VRL; 4157 BP.
XX
AC HQ661806;
XX
DT 20-APR-2011 (Rel. 108, Created)
DT 27-MAY-2011 (Rel. 109, Last updated, Version 2)
XX
DE Armero virus strain Co Ar 170396 segment M, complete sequence.
XX
KW .
XX
OS Armero virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus;
OC unclassified Phlebovirus.
XX
RN [1]
RP 1-4157
RX PUBMED; 21325481.
RA Palacios G., Travassos da Rosa A., Savji N., Sze W., Wick I., Guzman H.,
RA Hutchison S., Tesh R., Lipkin W.I.;
RT "Aguacate virus, a new antigenic complex of the genus Phlebovirus (family
RT Bunyaviridae)";
RL J. Gen. Virol. 92(PT 6):1445-1453(2011).
XX
RN [2]
RP 1-4157
RA Palacios G., Travassos da Rosa A., Savji N., Sze W., Wick I., Guzman H.,
RA Hutchison S., Tesh R., Lipkin W.I.;
RT ;
RL Submitted (29-NOV-2010) to the INSDC.
RL Center for Infection and Immunity, Columbia University, 722 West 168th
RL Street, 17th Floor, New York, NY 10032, USA
XX
CC GenBank Accession Numbers HQ661805-HQ661807 represent the complete
CC genome of Armero virus strain Co Ar 170396.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4157
FT /organism="Armero virus"
FT /segment="M"
FT /host="Lutzomyia sp."
FT /strain="Co Ar 170396"
FT /mol_type="genomic RNA"
FT /country="Colombia"
FT /collection_date="1986"
FT /note="serogroup: Aguacate"
FT /db_xref="taxon:1006584"
FT gene 23. .3952
FT /gene="GP"
FT CDS 23. .3952
FT /codon_start=1
FT /gene="GP"
FT /product="glycoprotein"
FT /protein_id="AEB70985.1"
FT /translation="MKIFQYICYISVVVSRLVLHYSTPTYSNKICFSSGSPESIVTNYW
FT MEVMESFPAGHQKCELGDGQFSAVALDDMPKFIKAMTTSDQALRLTCISQNDSYISELT
FT TDGDVIPGEFHSEIDCKSGSIIKELSKVNVAPAGVHARDLLLEDAETNAILQQRDQLIA
FT ELREKLRDSKVREDAALQRSKVNTELLSETKEKADKLQRRADELILHLESERAEGRISR
FT NRSKWLEHELKDAKEDISRLRLDVGRTTTRKPKSLIGLTTTIIPLMLLMTSEATKISKV
FT RAKCSHARNRIGSGKNVLPGVEDPTCSIINYETRCDSLESLMIEDLYPFASSHIHKQTL
FT LEALNDNFITKDSDGICNLQSDRKADCYNKRSRMRPFCPNGFRAAHYLDDEGKLRGIHC
FT PSGMEITEDCINCRKMKTSLTKHGSVQMQDAMCQEVQEQYSGPLPAPRGYCKIGNKEYK
FT KCKTSHTEPRHVPFISLKGVGKVYLDGLVIRNDEESEKNSFVCYKHKGQYATNEGTEAR
FT IYEVAKLSECSNFDSSKNGKCTGDHVFCSKYRCEQDYPEVSCVVAPGSGPVLVRFAGGW
FT VKPVCFGYENVIVDIEVPDYGMVQEEECEACVFSCDDDGIRIRTTGFKVNAVIACSSGH
FT CSTYSQTPSTNVFFRYPGMSYSDGSKIGVHLSHDDDTISSHMVLQCEARDSCSINSCLL
FT CSHTLINYQCHTFLSALICTLFLTSCIILAVLVIKRAFGCAKNIPSAIMGPIKWIKTLF
FT CWIMSRLRQCFTRQVQNINAEIGWRPNNRVVPIPRYTGFMAVMLSLFCLCSACSETVLS
FT NSKLSKCSVSEGKTVCTLNGAMVIKAGTIGTESCFVIKSPGGQKSHISLKTVSSELICR
FT EGDSFWTSDYAPKCLSSRRCYWVGECHSTNCQSWDSNTVSTEFLKFGNETRLNENKCFE
FT QCGGVSCGCFNMNPSCLFSHASLESVSKKAIRAFSCVDWTHRITFEMMDTKGQKETFSL
FT SDTGTKFTPWGSLSLGIDAESMTGTNSLMFLQDPLTGFALVDEELSSTPRAGFIGEVRC
FT SSEITAVSAHKSCKWAPNLIKYRPVTDYVECSSDLINPFTLFRRGFLPQYRNGKMFTQS
FT IDKKTVQAVSSLSIKATVRLLFEGLQVEFIDDENDCKAAQRNISGCYLCNEGSRVCLSI
FT TSKLNGSFYAESVSGLHLAIQVVAGTSDYCSYTHFDSPSVSETIRYSCGGAEKELHITG
FT TLISVEPHDDRNPQSSGSIVVNPREASWNIISWIKGFISFFGGPLKTAAIVVGLVILAL
FT IIIVIAVVIARSGVLKSMIQKAKIL"
XX
SQ Sequence 4157 BP; 1236 A; 863 C; 976 G; 1082 T; 0 other;
hq661806 Length: 4157 27-MAY-2011 Type: N Check: 9896 ..
1 acacaaagac ggcgtatatc ttatgaaaat ctttcagtac atctgttata
51 taagtgtcgt ggtgtcgaga ctagttctcc actactcaac tcccacttat
101 tctaacaaaa tctgctttag ctctggatca ccagagtcta tagttaccaa
151 ttactggatg gaagtgatgg agtcattccc tgccggccac caaaaatgtg
201 aacttggtga tggccaattt tcagctgtcg cattagacga tatgccaaag
251 ttcataaagg caatgacaac ttctgaccag gccctgagac ttacttgcat
301 tagtcagaat gacagctaca tttctgagct gaccactgat ggagatgtca
351 ttccaggaga gttccactct gagattgatt gcaagagtgg atcaataatt
401 aaggaattgt ccaaagtcaa tgtagcaccg gctggagttc atgccagaga
451 tttactgcta gaggatgcag agaccaatgc cattctgcag cagagggacc
501 agctgatagc tgaactaaga gaaaaattgc gggatagcaa ggtcagagaa
551 gatgctgcat tgcaaaggag taaggtaaac acagaacttc tttctgagac
601 aaaagagaag gctgacaaac tgcagagaag agctgatgaa ctgattcttc
651 acctggaaag tgagagagca gagggcagga tcagtaggaa caggtcaaag
701 tggctagagc atgagctcaa ggatgcaaag gaagatatct ctaggttaag
751 gttggatgtc ggaagaacca caaccaggaa gcctaaaagc ctcattggcc
801 taaccaccac aattattcca ctaatgttgc taatgacttc agaagccaca
851 aaaatatcca aagtaagagc caagtgctct cacgcaagga acagaattgg
901 cagtgggaag aacgttctac caggagttga ggaccccacc tgctcgatta
951 taaattatga gaccagatgt gattctctag aatctctaat gattgaggac
1001 ctatacccat ttgcctcatc acatatccac aagcaaacat tgctagaagc
1051 cctaaatgac aacttcatca caaaggatag tgatggaata tgcaatctgc
1101 agtcagatag gaaagcagat tgttataaca agaggagcag gatgagaccc
1151 ttttgtccaa atggctttcg tgctgcccac tacttggatg atgaagggaa
1201 gttgagagga attcattgcc ctagtggaat ggaaatcaca gaagactgca
1251 ttaattgcag gaagatgaaa acttctttga caaaacatgg aagtgtgcaa
1301 atgcaagatg caatgtgtca agaagtccaa gaacagtact ctggacctct
1351 ccctgcacct agaggctact gcaagattgg gaataaagaa tataagaagt
1401 gcaagacatc tcatactgaa ccaagacatg tacctttcat ctctctgaaa
1451 ggagttggta aagtgtattt ggatgggctg gttatcagaa atgatgagga
1501 gtctgaaaag aactcttttg tctgctataa gcacaaaggg cagtatgcaa
1551 ctaatgaagg gacagaagcg aggatctatg aagttgccaa actgtcagag
1601 tgttctaatt ttgacagttc aaagaatgga aagtgcacag gtgatcatgt
1651 cttctgctcc aaatacagat gtgagcagga ttatccagaa gtatcttgtg
1701 tggtagcccc aggatccggt cctgtgctgg tcaggtttgc aggaggatgg
1751 gtgaagcctg tttgttttgg ttacgagaat gtcattgttg acatagaggt
1801 tcccgattat ggaatggtgc aggaggagga gtgtgaggct tgtgtcttct
1851 cttgtgatga cgacggaatt cgtatcagaa caacaggatt caaagtcaat
1901 gctgtgattg catgctcaag tgggcattgc tcaacctatt cgcagacacc
1951 atcaacaaat gtgtttttta ggtacccagg aatgagctat agtgatggat
2001 caaagatagg ggttcatcta tctcatgatg atgacaccat aagctcgcac
2051 atggtgcttc agtgtgaggc tagagactct tgttccatca actcatgctt
2101 actatgctcc cacacattaa ttaactatca atgccacact ttcctcagtg
2151 cactcatctg cacactattc ctgacatctt gcattatact ggctgtccta
2201 gtgatcaaaa gggcttttgg gtgtgcaaag aacatccctt cagctattat
2251 gggcccaatt aaatggataa aaacactgtt ttgctggatc atgtctagac
2301 tgagacagtg ttttactagg caagtacaga atataaatgc agaaataggc
2351 tggaggccga ataacagggt tgtcccaata cctaggtaca ccggatttat
2401 ggcggtgatg ctgtcccttt tctgtctttg ctctgcctgc tctgaaaccg
2451 tcctgtccaa ctcaaagctc tcaaaatgct cagtgagtga aggaaagact
2501 gtatgcaccc taaatggagc tatggtgata aaagcaggaa ctataggaac
2551 tgaatcatgc tttgtgatca agtcacctgg aggccagaag tctcacatct
2601 ctctaaagac agtctcaagt gagctaatat gcagggaagg agactccttt
2651 tggacctcag attatgctcc caagtgctta agttccagaa ggtgttactg
2701 ggtgggtgag tgtcactcaa caaactgcca gtcgtgggat agcaacacag
2751 tttcgactga attcttaaaa tttggaaatg aaacaaggct taatgaaaac
2801 aaatgctttg agcagtgcgg tggggtatcc tgtgggtgct ttaacatgaa
2851 tccttcatgc ttattctcac acgctagctt ggaatcagtt agcaagaagg
2901 caattcgtgc gttctcttgt gtagattgga ctcacagaat cacatttgag
2951 atgatggaca ctaaaggaca aaaagagacg ttcagcctct cagacacagg
3001 gacaaaattc actccctggg gctcactgag tctagggata gatgctgagt
3051 ccatgaccgg gacaaactcc ttgatgttct tgcaagaccc cttaacggga
3101 tttgcgctag tggacgaaga gctatcctcc acccctaggg caggatttat
3151 aggagaagtc aggtgttcat cagaaataac tgcagtctca gcacacaagt
3201 cttgcaagtg ggcccccaac ctgatcaagt atagaccggt cactgattat
3251 gtggaatgtt cttctgacct cataaaccca tttactctct tcagaagggg
3301 ttttttacct cagtatagga atggcaagat gtttactcag tccatagata
3351 agaagaccgt ccaagcagtt tcttccctgt ctataaaggc cacagttaga
3401 ttgctctttg aaggcctgca agttgaattt attgatgatg agaatgactg
3451 caaagctgca caaaggaaca tctcgggttg ctatctctgt aatgaaggat
3501 caagagtgtg tctgagcatc actagtaagc tcaatggatc attttacgca
3551 gagtctgttt ctgggctgca cttagctatt caggttgtcg ctggtacttc
3601 agattactgc tcttacactc attttgattc acccagcgtt tctgagacga
3651 ttcgctactc ttgcggggga gctgagaaag agctacacat cactgggact
3701 ctaatttcgg tagagccgca tgatgacaga aaccctcagt catcaggttc
3751 tatagtagtc aatcctagag aggcctcctg gaacataatc tcttggatta
3801 agggattcat ctccttcttt ggaggacctc tcaagactgc agctatagtt
3851 gtcgggctag ttatactggc actcattata attgtcattg cagtcgtaat
3901 agccaggagt ggagtgctca aaagcatgat ccagaaggca aaaattctgt
3951 aagcccacat ccgctgcgcc tcccccatca tcaccaccat ccatcatcca
4001 cccaacaggg cagcacctca atcagtccct caggttaata ttggcactaa
4051 tagtgagagt aagaggttaa tatacaagac aagggcccgt gttacctatc
4101 agttgtatat gatactgtgg gattaataac ttagtgaaag aacgccggtc
4151 tttgtgt