Sequence of DPV Plum pox virus

Plum pox virus strain Marcus isolate 1625_TR-290pe polyprotein mRNA, partial cds.

ACC No: HQ674775

Dated: 2011-02-16 | Length: 783 | CRC: -1062009976

                
ID   HQ674775; SV 1; linear; mRNA; STD; VRL; 783 BP.
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AC   HQ674775;
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DT   16-FEB-2011 (Rel. 107, Created)
DT   16-FEB-2011 (Rel. 107, Last updated, Version 1)
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DE   Plum pox virus strain Marcus isolate 1625_TR-290pe polyprotein mRNA,
DE   partial cds.
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KW   .
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OS   Plum pox virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-783
RA   Gazel M., Ulubas Serce C., Caglayan K.;
RT   "First report of Plum Pox Virus in Hatay";
RL   J. Plant Pathol. 0:0-0(2011).
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RN   [2]
RP   1-783
RA   Gazel M., Ulubas Serce C., Caglayan K.;
RT   ;
RL   Submitted (03-DEC-2010) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection Department, Mustafa Kemal University, Faculty of
RL   Agriculture, Antakya, Hatay 31034, Turkey
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FH   Key             Location/Qualifiers
FH
FT   source          1. .783
FT                   /organism="Plum pox virus"
FT                   /host="Prunus persica (peach)"
FT                   /strain="Marcus"
FT                   /isolate="1625_TR-290pe"
FT                   /mol_type="mRNA"
FT                   /country="Turkey"
FT                   /note="sharco-id:1625"
FT                   /db_xref="taxon:12211"
FT   CDS             <1. .>783
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /protein_id="ADU04772.1"
FT                   /translation="WRELSWSERFSAILESQRWRKHIPKPFIPKDAADLGGRYDISVRS
FT                   LLGSQYKRLKDAVRRKRDDVVCYTHQSMGKLFCKAIGISTSFLPSTLKMFDMLIIFGLL
FT                   LSIGATCNSMINEHKHLKQVAADREDKKRFKRLQVLYTRLLEKIGCTPTADEFLEYVQG
FT                   ENPDLSKYAEDLIGDGQVVVHQSKRDSQANLERVVAFVALVMMLFDSERSEGVYKILNK
FT                   LKGVMGSIDQTVHHQSLDDIEDMLDEKKLTVDFVLQSN"
FT   mat_peptide     <1. .556
FT                   /product="P3"
FT   mat_peptide     557. .712
FT                   /product="6K1"
FT   mat_peptide     713. .781
FT                   /product="CI"
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SQ   Sequence 783 BP; 247 A; 145 C; 186 G; 205 T; 0 other;

hq674775 Length: 783  16-FEB-2011  Type: N  Check: 6093  ..

       1  ttggagagaa ttaagttggt cggaaaggtt ctctgcaatc ttggaatcgc
      51  agcggtggcg aaaacatata ccaaaacctt tcatcccgaa agacgcagca
     101  gatttaggag gcaggtacga catctccgtt cggtcattac ttggcagcca
     151  atacaaacgc ctgaaagacg cagttcggcg gaaaagagac gacgttgttt
     201  gttacacaca ccagtcgatg ggaaagctat tctgcaaagc tatcggaatt
     251  tccacaagtt ttcttccaag cactctgaag atgtttgaca tgctcatcat
     301  atttggtctc ctgctttcaa taggagccac atgcaattca atgattaatg
     351  agcacaaaca tttaaagcaa gttgctgccg atcgtgaaga taagaaaaga
     401  ttcaagagat tgcaggtctt gtatacgaga ctattagaaa agattggttg
     451  cacaccaaca gcggatgaat ttcttgaata tgtgcaaggt gagaaccctg
     501  atctatcgaa atatgcagaa gacttgattg gcgatgggca agttgttgtg
     551  catcaaagca aaagagattc acaagctaat ctggagcgag tcgtagcatt
     601  tgtagccctt gttatgatgc tttttgattc ggaacggagt gaaggtgttt
     651  acaaaatcct caataagctt aaaggtgtca tgggaagtat tgatcagact
     701  gttcaccatc aaagtttgga cgacattgaa gacatgttgg acgaaaagaa
     751  attgacagtc gatttcgtct tgcaaagtaa cga