Sequence of DPV Plum pox virus

Plum pox virus strain Marcus isolate 1623_TR-289pe polyprotein mRNA, partial cds.

ACC No: HQ674780

Dated: 2011-02-16 | Length: 798 | CRC: 953274172

                
ID   HQ674780; SV 1; linear; mRNA; STD; VRL; 798 BP.
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AC   HQ674780;
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DT   16-FEB-2011 (Rel. 107, Created)
DT   16-FEB-2011 (Rel. 107, Last updated, Version 1)
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DE   Plum pox virus strain Marcus isolate 1623_TR-289pe polyprotein mRNA,
DE   partial cds.
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KW   .
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OS   Plum pox virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-798
RA   Gazel M., Ulubas Serce C., Caglayan K.;
RT   "First report of Plum Pox Virus in Hatay";
RL   J. Plant Pathol. 0:0-0(2011).
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RN   [2]
RP   1-798
RA   Gazel M., Ulubas Serce C., Caglayan K.;
RT   ;
RL   Submitted (03-DEC-2010) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection Department, Mustafa Kemal University, Faculty of
RL   Agriculture, Antakya, Hatay 31034, Turkey
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FH   Key             Location/Qualifiers
FH
FT   source          1. .798
FT                   /organism="Plum pox virus"
FT                   /host="Prunus persica (peach)"
FT                   /strain="Marcus"
FT                   /isolate="1623_TR-289pe"
FT                   /mol_type="mRNA"
FT                   /country="Turkey"
FT                   /note="sharco-id:1623"
FT                   /db_xref="taxon:12211"
FT   CDS             <1. .>798
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADU04777.1"
FT                   /translation="QAWRELSWSERFSAILESQRWRKHIPKPFIPKDAADLGGRYDISV
FT                   RSLLGSQYKRLKDAVRRKRDDVVCYTHQSMGKLFCKAIGISTSFLPSTLKMFDMLIIFG
FT                   LLLSIGATCNSMINEHKHLKQVAADREDKKRFKRLQVLYTRLLEKIGCTPTADEFLEYV
FT                   QGENPDLSKYAEDLIGDGQVVVHQSKRDSQANLERVVAFVALVMMLFDSERSDGVYKIL
FT                   NKLKGVMGSIDQTVHHQSLDDIEDMLDEKKLTVDFVLQSNEVAP"
FT   mat_peptide     <1. .561
FT                   /product="P3"
FT   mat_peptide     562. .717
FT                   /product="6K1"
FT   mat_peptide     718. .798
FT                   /product="CI"
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SQ   Sequence 798 BP; 250 A; 151 C; 190 G; 207 T; 0 other;

hq674780 Length: 798  16-FEB-2011  Type: N  Check: 9058  ..

       1  caggcttgga gagaattaag ttggtcggaa aggttctctg caatcttgga
      51  atcgcagcgg tggcgaaaac atataccaaa acctttcatc ccgaaagacg
     101  cagcagattt aggaggcagg tacgacatct ccgttcggtc attacttggc
     151  agccaataca aacgcctgaa agacgcagtt cggcggaaaa gagacgacgt
     201  tgtttgttac acacaccagt cgatgggaaa gctattctgc aaagctatcg
     251  gaatttccac aagttttctt ccaagcactc tgaagatgtt tgacatgctc
     301  atcatatttg gtctcctgct ttcaatagga gccacatgca attcaatgat
     351  taatgagcac aaacatttaa agcaagttgc tgccgatcgt gaagataaga
     401  aaagattcaa gagattgcag gtcttgtata cgagactatt agaaaagatt
     451  ggttgcacac caacagcgga tgaatttctt gaatatgtgc aaggtgagaa
     501  ccctgatcta tcgaaatatg cagaggactt gattggcgat gggcaagttg
     551  ttgtgcatca aagcaaaaga gattcacaag ctaatctgga acgagtcgta
     601  gcatttgtag cccttgttat gatgcttttt gattcggaac ggagtgatgg
     651  tgtttacaaa atcctcaata agcttaaagg cgtcatggga agtattgatc
     701  agactgttca ccatcaaagt ttggacgaca ttgaagacat gttggacgaa
     751  aagaaattga cagtcgattt cgtcttgcaa agtaacgaag ttgcacca