Sequence of DPV Carnation mottle virus

Carnation mottle virus isolate MST movement protein (P7), movement protein (P9), and coat protein (CP) genes, complete cds.

ACC No: HQ704789

Dated: 2011-07-27 | Length: 1790 | CRC: 8368988

                
ID   HQ704789; SV 1; linear; genomic RNA; STD; VRL; 1790 BP.
XX
AC   HQ704789;
XX
DT   27-JUL-2011 (Rel. 109, Created)
DT   27-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Carnation mottle virus isolate MST movement protein (P7), movement protein
DE   (P9), and coat protein (CP) genes, complete cds.
XX
KW   .
XX
OS   Carnation mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC   Carmovirus.
XX
RN   [1]
RP   1-1790
RA   Tong A.Z., Wang L.C., Li X.P., Kong B.H., Chen H.R., Cai H.;
RT   "Carnation mottle virus p7 gene, p9 gene and cp gene, genomic RNA, isolate
RT   Yunnan, China";
RL   Unpublished.
XX
RN   [2]
RP   1-1790
RA   Tong A.Z., Wang L.C., Li X.P., Kong B.H., Chen H.R., Cai H.;
RT   ;
RL   Submitted (15-DEC-2010) to the INSDC.
RL   College of plant protection, Yunnan Agriculture University, Kunming, Yunnan
RL   650201, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1790
FT                   /organism="Carnation mottle virus"
FT                   /host="carnation"
FT                   /isolate="MST"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Sep-2010"
FT                   /db_xref="taxon:11986"
FT   gene            349. .534
FT                   /gene="P7"
FT   CDS             349. .534
FT                   /codon_start=1
FT                   /gene="P7"
FT                   /product="movement protein"
FT                   /protein_id="AEK77582.1"
FT                   /translation="MDIEPEVPVVEKQVLAGNRGKQKTRRSVAKDAIRKPASDSTNGGN
FT                   WVNVADKIEVHIHFNF"
FT   gene            440. .694
FT                   /gene="P9"
FT   CDS             440. .694
FT                   /codon_start=1
FT                   /gene="P9"
FT                   /product="movement protein"
FT                   /protein_id="AEK77583.1"
FT                   /translation="MPSVNLHLIVLTGVIGLMLLIRLRCTFTSTFSLPPLVTLNQIISL
FT                   SFCGLLLNSISRAERACYYNYSVDSSKQQHISISTPNGK"
FT   gene            684. .1730
FT                   /gene="CP"
FT   CDS             684. .1730
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AEK77584.1"
FT                   /translation="MENKGEKIAMNPTVQTLAQKGDKLAVKLVTRGWASLSTNQKRRAE
FT                   MLAGYTPAVLAFTPRRPRMTNPPPRTSRNSPGQAGKSMTMSKTELLCTVKGTTGVIPSF
FT                   EDWVVSPRNVAVFPQLSLLATNFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTP
FT                   PTTKVGFYDLGKHVETAAQTAKDLVIPVDGKTRFIRDSASDDAKLVDFGRIVLSTYGFD
FT                   KADTVVGELFIQYTIVLSDPTKTAKISQASNDKVSDGPTYVVPSVNGNELQLRVVAAGK
FT                   WCIIVRGTVEGGFTKPTLVGPGISGNVDYESARPIAICELVTQMEGQMLNITKTSAEQP
FT                   LQWVVYRM"
XX
SQ   Sequence 1790 BP; 527 A; 407 C; 465 G; 391 T; 0 other;

hq704789 Length: 1790  27-JUL-2011  Type: N  Check: 2096  ..

       1  acactggaac aacgaaacaa acgcaagaca gtggctaaag tcagtgggaa
      51  tgtgcggtct gcggattgcc gggggggttc cagttgtgca agagttctac
     101  caaaaatacg ttgaaacagc cggaaatgtg aaagagaaca agaatatcac
     151  agagaagagt agttctgggt tcttcatgat ggcggatcgc gctaagcggg
     201  gctattctgc tgtgtccgag gagtgtcgat atagcttcta ccaggcattc
     251  ggcatcacac ccgaccagca gatcgcattg gagggggaga tcaagtctct
     301  caccatcaac accaatgtgg ggccccagtg tgaagcggca gattcactat
     351  ggatattgaa ccggaagtac cagtagtcga aaagcaagtg ctcgctggaa
     401  atagaggaaa acaaaagaca cgtagatcgg tggccaaaga tgccatccgt
     451  aaacctgcat ctgatagtac taacgggggt aattgggtta atgttgctga
     501  taagattgag gtgcacattc acttcaactt ttagtttgcc cccactggta
     551  actttaaatc agataatatc gttgtcattt tgtggtcttc tattaaacag
     601  catctctcgg gcagaaagag cttgctatta taactactct gttgatagtt
     651  ccaaacaaca acacatttca ataagtacac caaatggaaa ataaaggaga
     701  aaagatcgcg atgaatccca ctgtgcaaac attggcgcag aagggggata
     751  agttagccgt gaagttggtg acaagagggt gggcctctct gagtacaaac
     801  cagaagagga gagctgaaat gcttgctgga tacaccccag cggtcctagc
     851  ctttacaccc cgacgaccac ggatgacaaa tcctcctcca agaaccagta
     901  ggaattcacc aggacaagct ggaaagtcca tgacgatgag taagaccgaa
     951  ctattatgca ccgtcaaagg taccacaggt gttatcccaa gctttgaaga
    1001  ctgggtcgtt tccccccgaa acgtagccgt tttccctcaa ctctcgctac
    1051  tggcgactaa cttcaacaag taccgcatca ctgcgctcac tgtgaagtac
    1101  tcaccagcat gtagcttcga gaccaatggg agggtggctc tgggattcaa
    1151  cgatgacgct tcggacacac caccaaccac caaggttggg ttttacgatc
    1201  tgggcaaaca tgtggaaact gctgcacaga cagctaaaga tctagtgata
    1251  ccagtagacg gcaaaacccg gttcatcagg gactcggcta gtgatgatgc
    1301  caaactagtc gattttggac gaatagtctt gtcaacatac gggtttgaca
    1351  aggctgacac tgtggtgggc gagttgttca tacagtacac aattgtactg
    1401  agtgacccaa ccaagacggc caaaatttca caggcaagca acgataaggt
    1451  gtcggacgga ccaacgtatg tggtcccttc ggttaatggc aacgagctgc
    1501  aactcagagt ggtagccgct gggaaatggt gtatcatagt gcggggcacg
    1551  gtcgaaggag gcttcaccaa acccacactt gttgggccag gaatcagcgg
    1601  taatgtagac tatgaaagtg ccagacctat cgccatttgt gagttggtga
    1651  cacaaatgga gggccagatg ttgaacatca ccaagacctc agcagaacaa
    1701  ccactccaat gggttgttta taggatgtga acgcaacaga aaagtttgtt
    1751  ggacacgcac ggcgggacgt gttgctagag ctgccactct