Sequence of DPV Soybean vein necrosis virus

Soybean vein necrosis virus isolate KS2 nucleocapsid protein gene, complete cds.

ACC No: HQ728382

Dated: 2013-04-10 | Length: 834 | CRC: 1308274611

                
ID   HQ728382; SV 1; linear; viral cRNA; STD; VRL; 834 BP.
XX
AC   HQ728382;
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DT   01-APR-2011 (Rel. 108, Created)
DT   10-APR-2013 (Rel. 116, Last updated, Version 3)
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DE   Soybean vein necrosis virus isolate KS2 nucleocapsid protein gene, complete
DE   cds.
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KW   .
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OS   Soybean vein necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-834
RX   PUBMED; 23550970.
RA   Zhou J., Tzanetakis I.;
RT   "Epidemiology of Soybean vein necrosis associated virus";
RL   Phytopathology 0:0-0(2013).
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RN   [2]
RP   1-834
RA   Zhou J., Tzanetakis I.E.;
RT   ;
RL   Submitted (18-DEC-2010) to the INSDC.
RL   Department of Plant Pathology, Cell and Molecular Biology Program,
RL   University of Arkansas, Plant Pathology-Plant Sciences Building, 495 N.
RL   Campus Drive, Room 217, Fayetteville, AR 72701, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .834
FT                   /organism="Soybean vein necrosis virus"
FT                   /host="soybean"
FT                   /isolate="KS2"
FT                   /mol_type="viral cRNA"
FT                   /country="USA"
FT                   /collection_date="Oct-2010"
FT                   /db_xref="taxon:980895"
FT   CDS             1. .834
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:F2Y3N0"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:F2Y3N0"
FT                   /protein_id="ADX96059.1"
FT                   /translation="MPQTAGPSNAKPVKLTESNLARLLKFEEDIEFEKSSTGFKFSEFY
FT                   KTHMGRKFRYASALTFLKNRKAIVNMCKKGTFNFDGQTVKLSVESGDDNSFTFKRLDSF
FT                   LRVKMLEHNFAVFDGTNEEAKQSLCNDLATIPLVQAYGLIVKDKMSAKLAIMIGGSLPL
FT                   LASITGCEAYCFGLAIFQDLKKEQLGIVNFDTKAQAAKVASVLDAKGFKFTEEKNQTLR
FT                   LIAEILKDMAPQMRGVASLEKYNEQIGIISDIIGVHFEMPGKKDGKGKKSKEFSV"
XX
SQ   Sequence 834 BP; 283 A; 147 C; 186 G; 218 T; 0 other;

hq728382 Length: 834  10-APR-2013  Type: N  Check: 976  ..

       1  atgccacaaa cagcaggacc aagcaatgca aaaccagtga agctcactga
      51  gtcaaaccta gcaaggcttc tcaaatttga agaggacata gaatttgaga
     101  aaagcagcac aggattcaag ttcagcgagt tctacaaaac ccacatgggt
     151  cgcaaattca ggtatgcatc tgcattgacc ttcctcaaaa acagaaaggc
     201  tattgtcaac atgtgcaaaa aagggacatt taattttgac ggacaaactg
     251  ttaaattgtc tgtagagagt ggtgatgaca atagcttcac ttttaaaaga
     301  ctggatagct ttttgagagt gaagatgctt gaacacaatt ttgcagtttt
     351  tgatggaaca aatgaagagg ctaaacaaag cttgtgcaat gatttagcaa
     401  ccatcccact tgtgcaagct tatggtctga ttgtgaaaga taagatgtca
     451  gcaaagcttg ccataatgat tggtggaagc ttaccccttc tggcatcaat
     501  cacaggttgt gaagcctatt gttttggttt agctatcttt caggacctaa
     551  agaaagaaca gcttggtatt gtcaactttg acacaaaggc tcaagctgct
     601  aaagttgcat ctgtgctgga tgcaaagggc tttaaattca ctgaagagaa
     651  aaatcaaact ctcaggctga ttgctgagat actgaaagac atggcacccc
     701  aaatgagagg agttgcatct cttgagaagt acaatgaaca gattggaatc
     751  atttctgata tcattggggt ccattttgaa atgcctggaa agaaagatgg
     801  aaaaggcaag aaatcaaagg agttttctgt ttaa