Sequence of DPV Unnamed Jiangsu phlebovirus
Phlebovirus JS6 segment L, complete sequence.
ACC No: HQ830169
Dated: 2011-06-01 | Length: 6368 | CRC: 234492375
ID HQ830169; SV 1; linear; viral cRNA; STD; VRL; 6368 BP.
XX
AC HQ830169;
XX
DT 01-JUN-2011 (Rel. 109, Created)
DT 01-JUN-2011 (Rel. 109, Last updated, Version 1)
XX
DE Phlebovirus JS6 segment L, complete sequence.
XX
KW .
XX
OS Phlebovirus JS6
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus;
OC unclassified Phlebovirus.
XX
RN [1]
RP 1-6368
RA Shan J., Zhao K.C., Cui L.B., Qi X., Shi Z.Y., Tang F.Y., Zhou M.H.,
RA Jiao Y.J., Guo X.L., Wang H.;
RT "Genetic characteristics of novel Phlebovirus related to epidemic fever
RT with thrombocytopenia syndrome in Jiangsu, China";
RL Unpublished.
XX
RN [2]
RP 1-6368
RA Shan J., Zhao K.C., Cui L.B., Qi X., Shi Z.Y., Tang F.Y., Zhou M.H.,
RA Jiao Y.J., Guo X.L., Wang H.;
RT ;
RL Submitted (27-DEC-2010) to the INSDC.
RL Institute of Pathogen Microbiology, Jiangsu Provincial Center for Disease,
RL 172 Jiangsu Road, Nanjing, Jiangsu 210009, China
XX
FH Key Location/Qualifiers
FH
FT source 1. .6368
FT /organism="Phlebovirus JS6"
FT /segment="L"
FT /host="Homo sapiens"
FT /strain="JS6"
FT /mol_type="viral cRNA"
FT /country="China"
FT /isolation_source="serum"
FT /collection_date="11-Oct-2010"
FT /db_xref="taxon:1010665"
FT CDS 17. .6271
FT /codon_start=1
FT /product="RNA polymerase"
FT /protein_id="AEC50117.1"
FT /translation="MDLEVLCGRINVENGLSLGEPGLYDQIYDRPGLPDLDVTVDATGV
FT TVDIGAVPDSASQLGSSINAGLITIQLSEAYKINHDFTFSGLSKTTDRRLSEVFPITHD
FT GSDGMTPDVIHTRLDGTIVVVEFSTTRSHNIGGLEAAYRTKIEKYRDPISRRVDIMENP
FT RVFFGVIVVSSGGVLSNMPLTQDEAEELMYRFCIANEIYTKARSMDADIELQKSEEELE
FT AISRALSFFSLFEPNIERVEGTFPNSEIEMLEQFLSTPADVDFITKTLKAKEVEAYADL
FT CDSHYLKPEKTIQERLEINRCEAIDKTQDLLAGLHARSNKQTSLNRGTVKLPPWLPKPS
FT SESIDIKTDSGFGSLMDHGAYGELWAKCLLDVSLGNVEGVVSDPAKELDIAISDDPEKD
FT TPKEAKITYRRFKPALSSSARQEFSLQGVEGKKWKRMAANQKKEKESHEALSPFLDVED
FT IGDFLTFNNLLADSRYGDESVQRAVSILLEKASAMQDTELTHALNDSFKRNLSSNVVQW
FT SLWVSCLAQELASALKQHCRAGEFIIKKLKFWPIYVIIKPTKSSSHIFYSLGIRKADVT
FT RRLTGRVFSDTIDAGEWELTEFKSLKTCKLTNLVNLPCTMLNSIAFWREKLGVAPWLVR
FT KPCSELREQVGLTFLISLEDKSKTEEIITLTRYTQMEGFVSPPMLPKPQKMLGKLDGPL
FT RTKLQVYLLRKHLDCMVRIASQPFSLIPREGRVEWGGTFHAISGRSTNLENMVNSWYIG
FT YYKNKEESTELNALGEMYKKIVEMEEDKPSSPEFLGWGDTDSPKKHEFSRSFLRAACSS
FT LEREIAQRHGRQWKQNLEERVLREIGTKNILDLASMKATSNFSKDWELYSEVQTKEYHR
FT SKLLEKMATLIEKGVMWYIDAVGQAWKAVLDDGCMRICLFKKNQHGGLREIYVMDANAR
FT LVQFGVETMARCVCELSPHETVANPRLKNSIIENHGLKSARSLGPGSININSSNDAKKW
FT NQGHYTTKLALVLCWFMPAKFHRFIWAAISMFRRKKMMVDLRFLAHLSSKSESRSSDPF
FT REAMTDAFHGNREVSWMDKGRTYIKTETGMMQGILHFTSSLLHSCVQSFYKSYFVSKLK
FT EGYMGESISGVVDVIEGSDDSAIMISIRPKSDMDEVRSRFFVANLLHSVKFLNPLFGIY
FT SSEKSTVNTVYCVEYNSEFHFHRHLVRPTLRWIAASHQISETEALASRQEDYSNLLTQC
FT LEGGASFSLTYLIQCTQLLHHYMLLGLCLHPLFGTFMGMLISDPDPALGFFLMDNPAFA
FT GGAGFRFNLWRACKTTDLGRKYAYYFNEIQGKTKGDEDYRALDATSGGTLSHSVMVYWG
FT DRKKYQALLSRMGLPEDWVEQIDENPGVLYRRAANKKELLLKLAEKVHSPGVTSSLSKG
FT HVVPRVVAAGVYLLSRHCFRFSSSIHGRGSTQKASLIKLLMMSSISAMKHGGSLNPNQE
FT RMLFPQAQEYDRVCTLLEEVEHLTGKFVVRERNIVRSRIDLFQEPVDLRCKAEDLVSEV
FT WFGLKRTKLGPRLLKEEWDKLRASFAWLSTDPSETLRDGPFLSHVQFRNFIAHVDAKSR
FT SVRLLGAPVKKSGGVTTISQVVRMNFFPGFSLEAEKSLDNQERLESISILKHVLFMVLN
FT GPYTEEYKLEMIIEAFSTLVIPQPSEVIRKSRTMTLCLLSNYLSSRGGSILDQIERAQS
FT GTLGGFSKPQKTFIRPGGGVGYKGKGVWTGVMEDTHVQILIDGDGASNWLEEIRLSSDA
FT RLYDVIESIRRLCDDLGINNRVASAYRGHCMVRLSGFKIKPASRTDGCPVRIMERGFRI
FT RELQNPDEVKMRVRGDILNLSVTIQEGRVMNILSYRPRDTDISESAAAYLWSNRDLFSF
FT GKKEPSCSWICLKTLDNWAWSHASVLLANDRKTQGIDNRAMGNIFRDCLEGSLRKQGLM
FT RSKLTEMVEKNVVPLTTQELVDILEEDIDFSDVIAVELSEGSLDIESIFDGAPILWSAE
FT VEEFGEGVVAVSYSSKYYHLTLMDQAAITMCAIMGKEGCRGLLTEKRCMAAIREQVRPF
FT LIFLQIPEDSISWVSDQFCDSRGLDEESTIMWG"
XX
SQ Sequence 6368 BP; 1764 A; 1391 C; 1691 G; 1522 T; 0 other;
hq830169 Length: 6368 01-JUN-2011 Type: N Check: 9060 ..
1 acacagagac gcccagatgg acttggaagt gctttgtggt aggataaacg
51 tggagaatgg gctgtctctt ggagaaccag gcctgtacga ccaaatctac
101 gacaggcctg ggctaccaga cctagatgtg actgtcgatg ccacaggtgt
151 aacagtggac ataggagctg tgccagactc agcatcacaa ctgggttcat
201 caatcaatgc tgggttgatc acaatccagc tctctgaagc atataagatc
251 aatcatgact tcacgttctc tggcctgtca aagacaacag atcgacgcct
301 ctcagaggtg ttccccatta cccatgatgg ttctgatggg atgactcctg
351 atgtgattca caccagattg gatgggacca ttgtggtggt tgaattttca
401 accactagga gccataacat tgggggcctg gaggcagcat ataggacaaa
451 gatagaaaaa tatagggacc caatctcaag gcgtgttgat atcatggaga
501 acccgagggt cttctttggc gttattgtag tctcgtcagg aggggttctg
551 tccaacatgc ccctgactca ggatgaggca gaggagctca tgtacaggtt
601 ttgcattgcc aatgagatct ataccaaggc tagatctatg gatgcagaca
651 ttgagctaca gaagagtgag gaagagcttg aggctattag cagggcacta
701 tcattcttca gtttgtttga gcctaacatt gaaagagtag aaggaacatt
751 ccctaattca gaaatcgaga tgctggaaca gtttctctca actccagctg
801 atgttgactt catcaccaag accctcaaag caaaagaggt agaggcctat
851 gctgatcttt gtgacagcca ctacctaaag cctgaaaaaa ccattcagga
901 gcggctagag atcaatagat gtgaggctat tgacaaaact caggacctcc
951 tagctggtct acatgcaagg agcaacaagc aaacatcatt gaatcgaggg
1001 acagtcaaac tcccgccctg gctaccaaag ccgtcaagtg agtcaataga
1051 catcaagacc gactcaggct ttggttcctt aatggatcat ggcgcatatg
1101 gtgagctgtg ggcaaagtgc cttctagatg tctcgctggg caatgtggag
1151 ggggtagtca gcgaccctgc aaaagaactt gacattgcca tctctgatga
1201 tcctgaaaaa gataccccca aagaggcaaa gataacctat aggcgattca
1251 agcctgcctt aagttcaagt gcccgtcaag aattttctct ccaaggagtg
1301 gaggggaaga agtggaagag aatggcagca aaccagaaga aagagaagga
1351 gtcccatgag gcattgagcc ctttcttgga tgttgaagac attggggatt
1401 tcctaacatt caacaatctt cttgcagatt ctaggtatgg agatgagtcc
1451 gtccagagag cagtgtcaat cttgttggaa aaggcatctg ccatgcaaga
1501 cacagagctc actcatgccc tcaacgattc attcaagagg aacctaagca
1551 gtaatgtggt tcagtggtcc ctttgggtct cttgtttagc acaggagcta
1601 gctagtgctc tgaagcagca ctgcagggct ggtgagttca tcatcaagaa
1651 gctgaaattc tggcctatct atgtcattat caagccgacc aaatcatcat
1701 cccatatctt ctacagctta gggattcgca aggctgacgt gacaaggagg
1751 ctcactggca gagtcttctc tgataccatt gatgctgggg aatgggagct
1801 aacagagttc aaaagcctga agacatgcaa gcttacaaac cttgtcaact
1851 tgccatgcac catgctgaac tcaatagctt tctggagaga gaagctgggc
1901 gtggctccat ggttggttcg aaaaccttgt tcagagctca gggagcaggt
1951 gggcctgacc ttcctgatca gtctggagga caagtctaag actgaggaga
2001 tcatcacctt gacaaggtac acccagatgg agggctttgt ctctcccccc
2051 atgctgccta agccccaaaa gatgctaggg aaactggatg gacctctgag
2101 aactaagcta caggtgtacc tcctcaggaa gcatctggat tgcatggtgc
2151 gaattgcttc tcagccattc agcctaattc ctagagaggg gagggtagaa
2201 tggggaggaa cattccatgc catctcaggc cggtccacaa accttgagaa
2251 tatggtgaac agctggtaca ttgggtacta caagaacaaa gaggagtcaa
2301 cagagctaaa tgcccttgga gaaatgtata agaagatcgt ggagatggaa
2351 gaggacaagc ccagcagccc tgagtttcta gggtgggggg acactgattc
2401 ccctaagaag catgaattct cacggagctt cctcagagct gcttgctcat
2451 ctctggagag agaaattgct cagcgacatg gaagacaatg gaagcagaac
2501 cttgaggagc gtgtcctgag agagattggg accaagaaca ttctggacct
2551 tgcatccatg aaggccacaa gcaacttttc caaagactgg gagctctact
2601 cagaagtcca gaccaaagag taccataggt ccaaactgtt ggagaagatg
2651 gccacattga ttgagaaagg ggtcatgtgg tacattgatg ctgtgggtca
2701 ggcatggaag gcagttctag atgatgggtg catgcgaatc tgtctcttca
2751 agaagaatca gcatggtggc ctcagagaga tctacgttat ggatgcgaat
2801 gcccgacttg tgcagtttgg ggtcgagaca atggctaggt gtgtctgtga
2851 actgagccca catgagactg ttgccaaccc taggctcaag aattccatca
2901 tagagaacca tgggctgaag tcagcccgta gtcttggccc tggctccata
2951 aacataaact catccaatga cgccaagaag tggaatcagg ggcactacac
3001 aacaaagcta gctctagttc tttgttggtt catgccagcc aaattccaca
3051 gattcatttg ggctgccatt tccatgtttc ggagaaaaaa gatgatggtg
3101 gacctaaggt ttctagctca cctcagttct aaatctgagt ctaggtcatc
3151 tgatccgttt agggaagcaa tgacagatgc cttccatggt aatagggaag
3201 tctcatggat ggacaaaggg cgaacttaca taaagacaga gacagggatg
3251 atgcagggca tactgcactt tacatccagt ctcctccact cttgtgttca
3301 gagcttttac aagtcttatt tcgtctcgaa gctcaaagag ggctacatgg
3351 gggaaagcat cagtggggtg gtggacgtca tagaaggttc tgacgactct
3401 gcgatcatga tcagcatacg ccctaagtca gacatggatg aagtccgatc
3451 aaggttcttt gttgctaact tgctccactc tgtcaagttc ttaaaccctt
3501 tgtttgggat ttattcatca gagaaatcaa cagtgaacac agtgtattgt
3551 gtcgagtata actctgaatt ccatttccac aggcacttgg ttagacccac
3601 actgagatgg atagcagcgt ctcaccaaat ctcagagact gaagcccttg
3651 caagcaggca agaggattac tctaaccttc tgacccagtg cttggaaggg
3701 ggggcctcat tctctcttac ctacctcata cagtgcactc agctcctaca
3751 ccactacatg cttctaggac tatgcttaca tcccttgttt ggaaccttca
3801 tggggatgct gatatcagac ccagatccag ccctagggtt ctttctcatg
3851 gacaaccctg cattcgcagg gggagcagga tttagattca atctgtggag
3901 agcctgcaag acaacagacc tagggcggaa gtatgcatat tatttcaatg
3951 agatacaggg taaaacaaag ggagatgagg actacagggc tctggacgcc
4001 acatcgggag gaactctcag ccactctgtt atggtgtact ggggggacag
4051 gaagaagtat caggccttat tgagcaggat gggccttcct gaagactggg
4101 tggagcagat agatgagaat cctggagtcc tttacaggag agcagccaac
4151 aagaaggaac tactcttaaa gctggcagag aaggttcatt cacctggtgt
4201 gactagcagc ctgagtaaag ggcatgtggt gcctcgggtg gtggcagcag
4251 gagtatacct cctctcacgc cactgctttc gctttagctc aagcatccat
4301 ggcaggggct caacacagaa ggctagcctt ataaaactgt tgatgatgtc
4351 ttctatttct gccatgaagc acgggggctc actaaaccct aatcaggagc
4401 gaatgctctt ccctcaggct caggagtatg acagggtgtg cacattgctt
4451 gaggaagttg aacacctaac agggaaattt gttgttaggg agaggaacat
4501 tgtcaggagc cgcatagact tgttccaaga gccagttgac ttgcggtgca
4551 aggcagaaga cctggtgtct gaggtgtggt ttggcctgaa aaggactaag
4601 cttgggcccc gtctcctcaa ggaagagtgg gacaaactta gggcctcatt
4651 tgcatggttg agcacagacc catctgaaac attgagggat ggtccttttc
4701 ttagccatgt gcagtttaga aacttcatag cccacgttga tgccaaatca
4751 agatcagtca ggctcctagg tgcccccgtg aagaaatcag gcggggtcac
4801 cactataagc caagtagtca gaatgaactt cttccctggt tttagcctag
4851 aagctgagaa gagcttagac aatcaggaaa ggcttgagag catctccatc
4901 ctcaagcatg tcttgttcat ggtcttgaat ggcccataca ctgaggagta
4951 caagctggaa atgatcatag aggccttctc tactcttgtg ataccacagc
5001 catcagaggt catcaggaaa tcaaggacca tgactttatg ccttttatcg
5051 aattacttgt ctagtagggg tgggtccatt ctagaccaga ttgagagggc
5101 acagtcaggc actctaggag gattcagcaa gccccagaag acattcatta
5151 ggccaggagg tggtgttggc tacaagggaa aaggtgtgtg gactggagtg
5201 atggaggaca cccatgtcca aattctgata gatggagatg gggctagtaa
5251 ctggcttgag gagatcaggc tcagtagtga tgccaggctt tatgatgtca
5301 ttgaatccat ccgaaggtta tgtgatgacc ttgggatcaa caacagggta
5351 gcatctgcat atagaggtca ttgcatggtt aggctgagtg gattcaagat
5401 caagccagca tcaaggactg acggctgtcc agtcaggatt atggaaaggg
5451 gcttcaggat tagggaactc caaaacccag atgaggtcaa gatgagagtg
5501 aggggcgaca tccttaacct ctctgtcact atacaagaag gaagggtcat
5551 gaacatccta agctacaggc cgagagacac tgacatatca gagtcagccg
5601 cagcatacct ctggagcaat cgagacctct tctcctttgg gaagaaggag
5651 ccatcctgca gctggatctg cttgaaaact cttgacaatt gggcctggtc
5701 acatgcctca gttctcctgg caaatgatag gaagacccaa ggcattgaca
5751 atagagctat ggggaacatc ttcagggact gtctcgaggg ttctctaaga
5801 aagcaagggc tgatgaggtc aaaactcaca gagatggttg agaagaatgt
5851 agttccttta acaactcaag agcttgtcga catactggag gaggacattg
5901 acttttcaga tgtcatagct gtagagctct cagagggatc gcttgacatt
5951 gaatccatct ttgatggagc acctatcttg tggtctgctg aggtggaaga
6001 gtttggagaa ggagtggtgg ctgtgagcta ttccagtaag tactatcatc
6051 taaccctgat ggaccaagct gccatcacaa tgtgtgcaat catgggcaag
6101 gaaggatgta gagggctcct tactgagaag agatgcatgg cagccatacg
6151 agagcaggta cggccattcc tcatattcct acaaattcct gaggacagca
6201 tttcttgggt atctgatcag ttctgcgact ccaggggtct tgatgaagag
6251 agcaccatta tgtggggtta actttaaaac acggttggta cgcagccgat
6301 gtgtctgtgg gtgactaggg aatgttggtt ttagaaggat ttccttaaga
6351 tctgggcggt ctttgtgt