Sequence of DPV Unnamed Jiangsu phlebovirus
Phlebovirus JS6 segment M, complete sequence.
ACC No: HQ830170
Dated: 2011-06-01 | Length: 3378 | CRC: 1177228070
ID HQ830170; SV 1; linear; viral cRNA; STD; VRL; 3378 BP.
XX
AC HQ830170;
XX
DT 01-JUN-2011 (Rel. 109, Created)
DT 01-JUN-2011 (Rel. 109, Last updated, Version 1)
XX
DE Phlebovirus JS6 segment M, complete sequence.
XX
KW .
XX
OS Phlebovirus JS6
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Phlebovirus;
OC unclassified Phlebovirus.
XX
RN [1]
RP 1-3378
RA Shan J., Zhao K.C., Cui L.B., Qi X., Shi Z.Y., Tang F.Y., Zhou M.H.,
RA Jiao Y.J., Guo X.L., Wang H.;
RT "Genetic characteristics of novel Phlebovirus related to epidemic fever
RT with thrombocytopenia syndrome in Jiangsu, China";
RL Unpublished.
XX
RN [2]
RP 1-3378
RA Shan J., Zhao K.C., Cui L.B., Qi X., Shi Z.Y., Tang F.Y., Zhou M.H.,
RA Jiao Y.J., Guo X.L., Wang H.;
RT ;
RL Submitted (27-DEC-2010) to the INSDC.
RL Institute of Pathogen Microbiology, Jiangsu Provincial Center for Disease,
RL 172 Jiangsu Road, Nanjing, Jiangsu 210009, China
XX
FH Key Location/Qualifiers
FH
FT source 1. .3378
FT /organism="Phlebovirus JS6"
FT /segment="M"
FT /host="Homo sapiens"
FT /strain="JS6"
FT /mol_type="viral cRNA"
FT /country="China"
FT /isolation_source="serum"
FT /collection_date="11-Oct-2010"
FT /db_xref="taxon:1010665"
FT CDS 19. .3240
FT /codon_start=1
FT /product="membrane glycoprotein polyprotein"
FT /protein_id="AEC50114.1"
FT /translation="MMKVIWFSSLICLVIQCGGDTGPIICAGPIHSNKSADIPHLLGYS
FT EKICQIDRLIHVSSWLRNHSQFQGYVGQRGGRSQVSYYPAENSYSRWSGLLSPCDADWL
FT GMLVVKKAKGSDMIVPGPSYKGKVFFERPTFDGYVGWGCGSGKSRTESGELCSSDSGTS
FT SGLLPSDRVLWIGDVACQPMTPIPEETFLELKSFSQSEFPDICKIDGIVFNQCEGESLP
FT QPFDVAWMDVGHSHKIIMREHKTKWVQESSSKDFVCYKEGTGPCSESEEKTCKTSGSCR
FT GDMQFCKVAGCEHGEEASEAKCRCSLVHKPGEVVVSYGGMRVRPKCYGFSRMMATLEVN
FT EPEQRIGQCTGCQLECINGGVRLITLTSELKSATVCASHFCSSATSGKKSTEIQFHSGS
FT LVGKTAIHVKGALVDGTEFTFEGSCMFPDGCDAVDCTFCREFLKNPQCYPAKKWLFIII
FT VILLGYAGLMLLTNVLKAIGVWGSWVIAPVKLVFAIIKKLMRAVSCLMGKLMDRGRQVI
FT HEEIGENREGNQDDVRIEMARPRRVRHWMYSPVILTILAMGLAEGCDEMVHADSKLVSC
FT RQGSGNMKECVTTGRALLPAVNPGQEACLHFTAPGSPDSKCLKIKVKRINLKCKKSSSY
FT FVPDARSRCTSVRRCRWAGDCQSGCPPHFTSNSFSDDWAGKMDRAGLGFSGCSDGCGGA
FT ACGCFNAAPSCIFWRKWVENPHGIIWKVSPCAAWVPSAVIELTMPSGEVRTFHPMSGIP
FT TQVFKGVSVTYLGSDMEVSGLTDLCEIEELKSKKLALAPCNQAGMGVVGKVGEIQCSSE
FT ESARTIKKDGCIWNADLVGIELRVDDAVCYSKITSVEAVANYSAIPTTIGGLRFERSHD
FT SQGKISGSPLDITAIRGSFSINYRGLRLSLSEITATCTGEVTNVSGCYSCMTGAKVSIK
FT LHSSKNSTAHVRCKGDETAFSVLEGVHSYSVSLSFDHAVVDEQCQLNCGGHESQVTLRG
FT NLIFLDVPKFVDGSYMQTYHSTVPTGANIPSPTDWLNALFGNGLSRWILGVIGVLLGGL
FT ALFFLIMSLFKLGTKQVFRSRTKLA"
XX
SQ Sequence 3378 BP; 860 A; 693 C; 970 G; 855 T; 0 other;
hq830170 Length: 3378 01-JUN-2011 Type: N Check: 5523 ..
1 acacagagac ggccaacaat gatgaaagtc atctggttct cctctctgat
51 ctgcttagtc attcaatgcg gtggggatac aggcccaatc atctgcgcag
101 gacccatcca ctcaaacaag agtgctgaca taccccacct gcttggctac
151 tctgagaaga tttgtcagat agatcggctg atacatgttt cgtcatggct
201 tagaaaccac tcacaatttc agggctacgt agggcagcga ggtggacgat
251 ctcaggtgag ctactaccca gctgaaaatt cttactcaag gtggagtgga
301 cttctaagcc cctgtgatgc tgattggctt gggatgcttg ttgtgaagaa
351 ggccaagggg tctgatatga tagttccagg gccttcatac aaggggaaag
401 tcttttttga acggccaact tttgatggat acgtaggctg gggctgtggt
451 agtgggaagt ctaggactga gtcaggtgag ctctgcagtt cagactccgg
501 gactagttct ggtcttctgc cctcagatag ggttctctgg ataggtgatg
551 ttgcttgtca gcctatgaca cccatccctg aggagacatt tctggagctg
601 aagagcttta gccaaagtga attcccagac atatgcaaaa ttgatggcat
651 tgtgttcaac cagtgtgagg gtgagagtct acctcagccc tttgatgttg
701 catggatgga tgttggccac tctcataaaa tcatcatgag ggagcacaag
751 accaaatggg tacaagagag ctcatccaag gattttgtgt gctacaagga
801 agggactggg ccttgttctg aatcagaaga aaagacttgc aagaccagtg
851 gatcatgcag gggggacatg cagttttgca aggtggcagg ttgtgaacat
901 ggggaagagg catctgaagc caagtgcaga tgctcacttg tgcacaagcc
951 cggggaagtc gttgtgtcat atggagggat gcgtgtcaga ccaaagtgct
1001 atggtttctc cagaatgatg gcaacactgg aggtgaacga accagagcag
1051 aggattggtc aatgcactgg ctgccaacta gaatgcataa atgggggtgt
1101 gaggctaatc actctaacca gtgagctcaa gtcagctact gtctgcgctt
1151 ctcacttctg tagttctgcc acaagtggta agaaaagcac ggagattcaa
1201 ttccactcag gatcattggt tgggaaaaca gcaatccacg tcaaaggggc
1251 attggtagat ggaactgaat tcacatttga gggtagttgc atgttcccag
1301 atggttgtga tgcagtggac tgcacattct gtcgtgagtt tctaaaaaat
1351 ccccagtgct accctgcaaa gaagtggctg ttcatcatta ttgtcatcct
1401 ccttggatat gcaggcctca tgctactcac caatgttctt aaggcaattg
1451 gggtttgggg gtcatgggtc atagctccag tgaagctagt gtttgccatc
1501 ataaagaaac taatgagagc tgtgagctgc ctgatgggga aattgatgga
1551 tagaggaagg caagtgatcc atgaggaaat aggggagaat agagagggca
1601 accaagatga tgttaggatt gagatggcca gacccaggag ggtaaggcat
1651 tggatgtact cgcctgtcat cctgactatt ctagcaatgg ggcttgctga
1701 gggctgtgat gagatggtcc atgctgattc taaacttgtt tcgtgcaggc
1751 aagggagcgg aaatatgaag gaatgtgtca caactgggag ggcgcttctt
1801 cctgcagtga acccagggca agaggcgtgt ctgcacttca cggcacctgg
1851 aagtccggac tcaaaatgtc tcaaaattaa ggttaagagg atcaacctaa
1901 aatgtaaaaa gtcatcatca tattttgttc ctgatgcccg gtccaggtgt
1951 acatcagtga ggagatgtcg ttgggcaggg gactgccagt ctgggtgccc
2001 ccctcatttc acatccaact ccttttctga tgattgggca ggtaagatgg
2051 acagggctgg tctaggattc agtggctgct ctgatggatg tggaggagca
2101 gcctgtggtt gctttaatgc ggccccttct tgcattttct ggaggaaatg
2151 ggtagagaat ccacatggga tcatctggaa agtatctcca tgtgctgcat
2201 gggtcccatc agcggttata gagctaacaa tgccctcagg ggaggtgagg
2251 acattccacc ccatgagcgg aatccccaca caagtcttca agggtgtgag
2301 tgtaacttac ttgggctcag atatggaggt gtcaggcttg actgacctgt
2351 gtgagataga agagctcaag tcaaagaagc ttgcattagc tccctgcaac
2401 caggctggta tgggggttgt aggcaaggtt ggagagatac agtgcagtag
2451 cgaggaaagt gcccgtacca taaaaaaaga tgggtgcata tggaatgctg
2501 acctcgtggg tatagagcta cgggtggatg acgctgtgtg ctactctaag
2551 atcactagtg tggaggcagt tgcaaactac tccgccatac ccaccactat
2601 tggggggctg aggtttgaga gaagccatga cagccagggc aaaatatctg
2651 gtagccccct ggacatcaca gctataagag gatctttttc tatcaattat
2701 agaggccttc gactgagcct ctcagaaatt actgctactt gcacagggga
2751 agtgacaaat gtgagtgggt gttattcttg catgacaggc gccaaagtct
2801 ccatcaagtt gcatagcagc aaaaatagca ctgcccatgt aagatgcaaa
2851 ggggatgaga ctgccttcag tgtcttggag ggagtccata gctactctgt
2901 cagtctcagt tttgatcatg cagtagttga tgagcagtgc caactgaact
2951 gtgggggaca tgagagtcaa gtgactctga gaggcaacct catcttcctg
3001 gatgtcccga aatttgtgga tggcagctac atgcagacat atcatagcac
3051 tgtgcccaca ggggcaaata tcccaagccc tacagattgg ctaaatgcct
3101 tgtttggcaa tgggctgagt aggtggatcc tgggggtgat aggggtccta
3151 ctggggggat tggctctctt tttcttgatc atgtctttgt tcaagctggg
3201 aacaaaacag gtatttcgat cgaggacgaa gctggcttaa atgggcatat
3251 ttctggtcta atgaccctct gggggcagtg ctctcagggg agttggctca
3301 cagtgtgcat gtttcgtggt cctggctcac attcttagag catagaggtt
3351 ctgttgaagt gttggccggt ctttgtgt