Sequence of DPV Jeju virus
Jeju virus strain 10-11 glycoprotein precursor, gene, complete cds.
ACC No: HQ834696
Dated: 2012-03-22 | Length: 3570 | CRC: 234240604
ID HQ834696; SV 1; linear; viral cRNA; STD; VRL; 3570 BP.
XX
AC HQ834696;
XX
DT 22-MAR-2012 (Rel. 112, Created)
DT 22-MAR-2012 (Rel. 112, Last updated, Version 1)
XX
DE Jeju virus strain 10-11 glycoprotein precursor, gene, complete cds.
XX
KW .
XX
OS Jeju virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Hantavirus;
OC unclassified Hantavirus.
XX
RN [1]
RP 1-3570
RX PUBMED; 22230701.
RA Arai S., Gu S.H., Baek L.J., Tabara K., Bennett S.N., Oh H.S., Takada N.,
RA Kang H.J., Tanaka-Taya K., Morikawa S., Okabe N., Yanagihara R., Song J.W.;
RT "Divergent ancestral lineages of newfound hantaviruses harbored by
RT phylogenetically related crocidurine shrew species in Korea";
RL Virology 424(2):99-105(2012).
XX
RN [2]
RP 1-3570
RA Gu S.H., Baek L.J., Yanagihara R., Song J.-W.;
RT ;
RL Submitted (28-DEC-2010) to the INSDC.
RL Department of Microbiology, College of Medicine, Korea University, 5-ga,
RL Anam-dong, Sungbuk-gu, Seoul 136-705, Korea
XX
FH Key Location/Qualifiers
FH
FT source 1. .3570
FT /organism="Jeju virus"
FT /segment="M"
FT /host="Crocidura shantungensis"
FT /strain="10-11"
FT /mol_type="viral cRNA"
FT /country="South Korea"
FT /isolation_source="lung tissue"
FT /collection_date="29-Apr-2010"
FT /db_xref="taxon:990280"
FT CDS 39. .3470
FT /codon_start=1
FT /product="glycoprotein precursor"
FT /protein_id="AEX56232.1"
FT /translation="MRADRLSKYCLIIFLLVLVKDVKLRNVYELLLECPLAANYHMGEI
FT TLHGSVVLPPINVQDVSTLEIESSCSMDVHNSGKTAHSLTELTWNKKADHSGNAAESSF
FT EFKSAEKSLKGICKITHKTVEQAYKLHKSVICYDLICNQTMCKPELHFLSQMWACTSMR
FT SCVIAVGPHRVQVTFKKTFCSTGVVVEGRCFRPDRTTTLNKRSTFIEYTTLPLHCFLVQ
FT HNNEKQKLVAELEKLKTDGCTSNTHAFQGYYLCVTGGSTELIKVPTSDDERSQAILKAI
FT FKAPYGEDHDNMDEPFGAIRIAGSGNGKVPSTETADNIKGVAFSGTPMYSSLSVFTKKQ
FT EGDLAFSPGILINYNHTGCDSKALPLVWSGYTTIPGVFESINQCSVFCVLSGPGASCDA
FT FAEGGIYNLTSPTCLVSKHTFIKSTEQQVTFVCQRLDTDIIVYCNGQKKTILTRTLVIG
FT QCIYTLTSIFSLLPSVAHSIAIELCVPGFHGWATIALIITFCFGWLLIPSITWLILFIL
FT KFSVRMVRSYTEENSFKTLLRRIRDEYERTKGSMVCDVCKTECETQKELKSHQISCSKE
FT QCPYCFTHCEPSEIAFQAHYKVCQVTNRFSDDLKKTITQGPMRPGCYRTLNLFRYRSRC
FT YIFTVWMTLLIIESILWAASAEPDPLKPNWVDTAHGIGHYVMLTDLELDFSLLSSSQYT
FT YRRKLVSASNPDDSTVLHIEIDAQLITAEIQPLGHWYDAMLNVKTSFHCYGACNKYTYP
FT WQSTKCFVERDFQYESSWGCNPVDCPGIGTGCTACGLYLDKFKPVGTAYKIVNLRYTRH
FT VCVQFSDETMCKVIESNDCFIAKNFKICLIGTVTKFQNGDTLLFLGPLEAGGIILKQWC
FT TTNCQYGDPGDIMLGINQQYSCPDYIGAMRKRCVFGHTPVCEYNGNLISGYRKLIATID
FT SFQSFNVSNIHISQSSLEWADPDGLLKDHINVLVNRDINFEDLAENPCRIQVQTINIEG
FT AWGSGVGFTVKCIVSLTECPTFLTSIKACDAAICYGAASVKLIRGQNTVRVTGKGGHSG
FT SKFRCCHEENCSPTGLLAAAPHLDRVSGVDALSEEKVFDDGAPSCKVKCWLVKTGEWLR
FT GLLSGNWMVVIVLVVTLFISIVCMTIFCPVRKIKRG"
XX
SQ Sequence 3570 BP; 1148 A; 591 C; 744 G; 1087 T; 0 other;
hq834696 Length: 3570 22-MAR-2012 Type: N Check: 5836 ..
1 tagtagtaga ctccgcaaaa agaagtacaa aagaaaaaat gagagctgat
51 aggttatcaa agtattgcct gatcatattt ctattagtgc ttgtgaagga
101 tgtaaaattg agaaatgtct atgagctatt actggagtgc cccttagcag
151 caaattatca catgggagaa ataacattac atggatctgt tgtactacca
201 ccaatcaatg tacaagatgt aagcaccctt gaaatagaaa gttcatgtag
251 tatggatgtg cataattctg gcaaaactgc ccatagtctc acagagctta
301 catggaacaa aaaggctgat cacagtggga atgctgcaga gagttcattt
351 gagttcaaat ctgcagaaaa atctttaaag ggaatatgca aaattaccca
401 caagactgta gaacaggctt ataaactgca taaatcggta atatgctatg
451 acctaatctg taaccagaca atgtgcaagc cagaacttca tttccttagc
501 cagatgtggg catgcacatc tatgagaagc tgtgttattg cagtaggtcc
551 ccatagggta caggtgacat tcaaaaaaac attctgttct acaggggtag
601 tagtagaagg acgttgcttt agaccagatc gtacaactac actcaacaag
651 cgatcaacat tcatagagta tacaacattg ccattgcatt gtttccttgt
701 gcaacataat aatgaaaagc aaaaattagt tgcagagttg gagaagttaa
751 agactgatgg ctgtacctca aacacacatg catttcaagg ctattattta
801 tgtgtcactg gtggctcaac agaactaatc aaagtcccaa caagtgatga
851 tgagagatca caagctatcc taaaggccat tttcaaggca ccatatggtg
901 aggatcatga taatatggat gaaccatttg gtgcaatcag aattgcaggt
951 tctggtaatg ggaaagtacc ttcaacagaa acagctgata atataaaggg
1001 tgtagcattt tcagggaccc caatgtactc ttcattaagt gtcttcacaa
1051 aaaaacaaga aggtgaccta gcatttagtc caggaatttt aataaactac
1101 aatcatactg gatgtgacag taaagctcta ccattagtat ggtcgggcta
1151 cacaactatc cctggtgttt tcgaatcaat taaccaatgt tcagtctttt
1201 gtgttttatc tggacctgga gcctcttgtg atgcatttgc tgaaggaggc
1251 atttacaatc tgacttcccc aacttgtcta gtatccaagc atacttttat
1301 taagagtaca gagcagcaag ttacatttgt ctgccaaagg ttagatacag
1351 acatcatagt ttattgtaat ggccagaaga agactattct gactaggact
1401 ctagttattg gtcaatgtat ttacacactt acaagcatat tttccctttt
1451 gccaagtgtt gcacattcaa ttgcaatcga gttgtgtgtt cctggctttc
1501 atgggtgggc aactattgca ttaattataa cattctgttt tgggtggctt
1551 ctaataccaa gtataacatg gttaatcctt tttattctaa aattttctgt
1601 tcgaatggtg agaagttata ctgaagaaaa tagtttcaaa acattattac
1651 gtcggataag ggatgaatat gagagaacaa aaggttcaat ggtatgtgat
1701 gtatgtaaaa ctgaatgcga aacccaaaaa gaattaaagt cacatcagat
1751 ttcctgttct aaggagcaat gcccatattg ttttacccat tgtgaaccat
1801 cagagattgc atttcaagcc cactataaag tgtgccaagt tacaaaccgg
1851 ttctctgatg acttgaaaaa gactataact caagggccaa tgagaccagg
1901 gtgctataga acattaaact tattcaggta tcgtagtaga tgttatatct
1951 ttactgtttg gatgacacta ttgataatag aatctatatt gtgggcagca
2001 agtgctgagc ctgatccact aaaaccaaac tgggttgata cagcccatgg
2051 tataggacat tatgtaatgc ttactgattt agaattggat ttctcactgt
2101 tgtcaagctc tcaatacaca tatagaagaa agttagtgag tgcttcaaat
2151 cctgatgatt ctacagtcct tcatatagag atagatgctc aacttataac
2201 tgcagaaata caacctttag ggcactggta tgatgcaatg cttaatgtca
2251 aaacatcatt tcattgttat ggtgcatgta ataaatatac atatccttgg
2301 cagtctacaa aatgctttgt tgaaagagat ttccagtatg aaagtagctg
2351 gggctgtaac ccagtagatt gtcctgggat cgggacaggc tgcactgctt
2401 gcggtctata tttagataag tttaagccag taggcactgc ttataaaatt
2451 gttaatttaa gatatacaag gcatgtctgt gttcaattta gtgatgaaac
2501 aatgtgtaaa gttatagaat ctaatgattg ctttatagct aaaaacttta
2551 agatctgcct aattgggaca gtcacaaaat ttcaaaatgg tgatacattg
2601 ttgtttcttg ggcctttaga agcaggtggc attatactta aacagtggtg
2651 cactacaaat tgccaatatg gtgatcctgg tgatattatg ttaggtataa
2701 atcagcagta cagctgtcct gactacatag gggcaatgag aaaacgttgt
2751 gtttttggcc atacaccagt gtgcgaatat aatggtaatt taatttctgg
2801 ttatagaaag ttaattgcaa caattgattc atttcagtca tttaatgtaa
2851 gtaatattca tatcagtcag agttctttag aatgggcaga cccagatggc
2901 ttattaaagg accatatcaa tgtattagtt aatagggata taaattttga
2951 agacttagca gagaatccat gtagaataca agttcagaca atcaatattg
3001 aaggtgcttg gggttcaggt gtaggtttta cagttaaatg tatagtatca
3051 ttaacagagt gtcccacgtt tctaacatca attaaagctt gtgatgcagc
3101 catttgctat ggagcagcta gtgtgaagct tataagagga cagaacacag
3151 ttagagttac aggaaaaggg ggccatagtg gttctaagtt tcgttgctgt
3201 catgaggaaa attgttcacc tactgggctt cttgcagctg caccacactt
3251 agatagagtt tcaggagttg atgcattaag tgaagaaaaa gtatttgatg
3301 atggtgcacc ttcctgtaaa gttaaatgtt ggcttgtcaa aacaggggag
3351 tggcttaggg gccttttatc aggtaattgg atggtagtga ttgtcttagt
3401 tgtaacactg tttatttcaa tagtctgtat gactattttt tgccctgtga
3451 gaaagattaa acgaggttag gtggtaatct taaatgctaa aaaaaatgat
3501 ctctttccac ttgtaaaaat tagttgttct ggctctggga cacctattct
3551 ttttgcggag tctactacta