Sequence of DPV Sweet potato feathery mottle virus

Sweet potato feathery mottle virus isolate Anhui1 coat protein gene, partial cds.

ACC No: HQ844076

Dated: 2013-02-27 | Length: 933 | CRC: -616475413

                
ID   HQ844076; SV 1; linear; genomic RNA; STD; VRL; 933 BP.
XX
AC   HQ844076;
XX
DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
XX
DE   Sweet potato feathery mottle virus isolate Anhui1 coat protein gene,
DE   partial cds.
XX
KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-933
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
XX
RN   [2]
RP   1-933
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .933
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Anhui1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:12844"
FT   CDS             <1. .>933
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCD1"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCD1"
FT                   /protein_id="AEG79912.1"
FT                   /translation="TEFKDARADPPAPKPKDIPPPPTITEVIDPEDPKQAALKAARAKQ
FT                   PATIPESYGRDTSKEKESIVGASSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQPMVNG
FT                   RAIINFQHLSTYEPEQFEVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCI
FT                   ENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKA
FT                   YMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQMKAAALKNAKNRLFGLDGN
FT                   VSTQEEDTERHTTTDVTRNIHNLLGMRGVQ"
XX
SQ   Sequence 933 BP; 305 A; 186 C; 233 G; 209 T; 0 other;

hq844076 Length: 933  27-FEB-2013  Type: N  Check: 9740  ..

       1  actgaattca aagatgcacg tgcggaccct ccagccccta agcctaagga
      51  tatccctcca ccacccacaa taactgaggt tattgatcca gaagacccaa
     101  agcaggcagc tttgaaagct gcacgagcta agcaacccgc aaccattcca
     151  gaatcatatg gacgagacac tagcaaggag aaggaatcaa tagtgggggc
     201  atcatcaaag ggtgtgaggg ataaagatgt aaacgttggt acagttggta
     251  cgttcgtcgt gccacgtgtt aagatgaatg caaacaagaa aaggcaacca
     301  atggtaaatg gaagggccat tataaatttc caacacttgt caacatatga
     351  gccagaacag tttgaggttg caaacacccg gtcaactcaa gaacagtttc
     401  aagcatggta tgaaggagtg aaaggggact atggtgttga cgatacagga
     451  atggggatct tattgaatgg attaatggtt tggtgcattg aaaatggcac
     501  atccccgaat ataaatggtg tgtggacaat gatggatggt gatgagcaag
     551  tgacatatcc aattaaacca ttgttggacc atgcagtgcc tacttttagg
     601  cagattatga cgcacttcag tgacgttgct gaagcttaca tagagatgcg
     651  aaaccgtaca aaggcgtaca tgccaaggta tggtctacaa cgtaatttga
     701  ctgatatgag tcttgcgcga tatgcatttg atttctacga gctgcattca
     751  accacccctg cacgtgcaaa agaagcacac ttacagatga aggcagccgc
     801  acttaagaat gcgaaaaatc ggttgtttgg tttggacgga aacgtctcca
     851  cgcaagaaga agatacggag aggcacacga caactgatgt tactagaaat
     901  atacataacc tcttaggaat gaggggtgtg caa