Sequence of DPV Sweet potato feathery mottle virus

Sweet potato feathery mottle virus isolate Hubei7 coat protein gene, partial cds.

ACC No: HQ844092

Dated: 2013-02-27 | Length: 945 | CRC: -2117873653

                
ID   HQ844092; SV 1; linear; genomic RNA; STD; VRL; 945 BP.
XX
AC   HQ844092;
XX
DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
XX
DE   Sweet potato feathery mottle virus isolate Hubei7 coat protein gene,
DE   partial cds.
XX
KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-945
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
XX
RN   [2]
RP   1-945
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .945
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Hubei7"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:12844"
FT   CDS             <1. .>945
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCE7"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCE7"
FT                   /protein_id="AEG79928.1"
FT                   /translation="SNESTEFKDAGANPPAPKPKDIPPPPTITEVTDPEDPKQAALRAA
FT                   RAKQPATIPESYGRDTSKEKESIVGASSKGVRDKDVNAGTVGTFVVPRVKMNANKKRQP
FT                   MVNGRAIINFQHLSTYEPELFEVANTRSTQEQFQAWYKGVKGDYGVDDTGMGILLNGLM
FT                   VWCIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRN
FT                   RTKAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQMKAAAPKNAKNRLFG
FT                   LDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ"
XX
SQ   Sequence 945 BP; 308 A; 185 C; 238 G; 214 T; 0 other;

hq844092 Length: 945  27-FEB-2013  Type: N  Check: 9079  ..

       1  tctaatgaga gtactgaatt taaagatgcg ggagcgaatc ctccagcccc
      51  taagcctaag gatatccctc caccacccac aataactgag gttactgatc
     101  cagaagaccc aaagcaggca gctttgagag ctgcacgagc taagcaaccc
     151  gcaaccattc cagaatcata tggacgagac acaagcaagg agaaggaatc
     201  aatagtgggg gcatcatcaa agggtgtgag ggataaagat gtaaacgctg
     251  gtacagttgg tacgtttgtc gtgccacgtg ttaagatgaa tgcaaacaag
     301  aaaaggcaac caatggtaaa cggaagagcc attataaatt tccaacactt
     351  gtcaacatat gagccagaac tgtttgaggt tgcaaacacc cggtcgactc
     401  aagaacagtt tcaagcatgg tataagggag tgaaagggga ctatggtgtt
     451  gatgatacag gaatggggat cttattgaat ggattaatgg tttggtgcat
     501  tgaaaatggc acatccccaa atataaatgg tgtgtggact atgatggatg
     551  gtgatgagca agtgacatat ccaattaaac cattgttgga ccatgcagtg
     601  cctactttta ggcagattat gacgcacttc agtgacgttg ctgaagctta
     651  catagagatg cgaaaccgta caaaggcgta catgccaagg tatggtctac
     701  aacgtaattt gactgatatg agtcttgcgc gatatgcatt tgatttctac
     751  gagctgcatt caactacccc tgcacgtgca aaagaagcac atttacagat
     801  gaaggcagcc gcgcccaaga atgcgaaaaa tcggttgttt ggtttggacg
     851  gaaacgtctc cacgcaagaa gaagatacgg agaggcacac gacaactgat
     901  gttactagaa atatacataa cctcttagga atgaggggtg tgcaa