Sequence of DPV Sweet potato feathery mottle virus

Sweet potato feathery mottle virus isolate Jiangsu4 coat protein gene, partial cds.

ACC No: HQ844104

Dated: 2013-02-27 | Length: 945 | CRC: -635924732

                
ID   HQ844104; SV 1; linear; genomic RNA; STD; VRL; 945 BP.
XX
AC   HQ844104;
XX
DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
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DE   Sweet potato feathery mottle virus isolate Jiangsu4 coat protein gene,
DE   partial cds.
XX
KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-945
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
XX
RN   [2]
RP   1-945
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .945
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Jiangsu4"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:12844"
FT   CDS             <1. .>945
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCF8"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCF8"
FT                   /protein_id="AEG79939.1"
FT                   /translation="SNENTEFKDAGANPPAPKSNINPPPPTITEVVDPEDPKQAALKAA
FT                   RAKQPATIPESYGRDTSKEKESIVGASSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQP
FT                   MVNGRAIINFQHLSTYEPEQFEVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLM
FT                   VWCIENGTSPNINGVWTMMDGDEQVTYPIKPLLGHAVPTFRQIMTHFSDVAEAYIEMRN
FT                   RTKAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQTKAAALKNARNRLFG
FT                   LDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ"
XX
SQ   Sequence 945 BP; 306 A; 182 C; 238 G; 219 T; 0 other;

hq844104 Length: 945  27-FEB-2013  Type: N  Check: 481  ..

       1  tctaatgaga atactgaatt taaagatgct ggagcgaacc ctccagcccc
      51  taagtccaat atcaatcctc caccacctac aataactgag gtcgttgatc
     101  cggaggaccc gaagcaagca gctttaaaag ctgcacgagc aaagcaaccc
     151  gcaaccattc cagaatcata tgggcgtgat acgagcaagg agaaggaatc
     201  aatagtgggg gcatcatcaa agggtgtgag ggataaagat gtaaacgttg
     251  gtacagttgg tacgtttgtc gtgccacgtg ttaagatgaa tgcaaacaag
     301  aaaaggcaac caatggtaaa tggaagggcc attataaatt tccaacactt
     351  gtcaacatat gagccagaac agtttgaggt tgcaaacacc cggtcgactc
     401  aagaacagtt tcaagcatgg tatgagggag tgaaagggga ctatggtgtc
     451  gatgatacag gaatggggat cttattgaat ggattaatgg tttggtgtat
     501  tgaaaatggc acatccccaa atataaatgg tgtgtggact atgatggatg
     551  gtgatgagca agtgacatat ccaattaaac cattgttggg ccatgcagtg
     601  cctactttta ggcagatcat gacgcacttc agtgacgttg ctgaagccta
     651  tatagaaatg cgaaaccgta caaaggcata catgccaagg tatggtctac
     701  aacgtaactt gactgatatg agtcttgcgc gatatgcatt tgatttttac
     751  gagctgcatt caactacacc tgcacgtgct aaagaagcac atttacagac
     801  gaaggcagcc gcacttaaga atgcgcgaaa tcggttgttt ggtttggacg
     851  gaaacgtctc cacgcaagaa gaagatacgg agaggcacac gacaactgat
     901  gttactagaa atatacataa cctcttagga atgaggggtg tgcaa