Sequence of DPV Sweet potato feathery mottle virus

Sweet potato feathery mottle virus isolate Liaoning coat protein gene, partial cds.

ACC No: HQ844112

Dated: 2013-02-27 | Length: 927 | CRC: 1163683587

                
ID   HQ844112; SV 1; linear; genomic RNA; STD; VRL; 927 BP.
XX
AC   HQ844112;
XX
DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
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DE   Sweet potato feathery mottle virus isolate Liaoning coat protein gene,
DE   partial cds.
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KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-927
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
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RN   [2]
RP   1-927
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .927
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Liaoning"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:12844"
FT   CDS             <1. .>927
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCG6"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCG6"
FT                   /protein_id="AEG79947.1"
FT                   /translation="TEFKDAVANPSAPKPKGAFTAPEITEVTEQEDPKQAALREARQKQ
FT                   PAVTPESYGRDTGEKSMRSVSPQRVKDKDVNVGTTGTFVVPRVKLHTGKMRQPRVNGIS
FT                   VVNLQHLATYEPEQHNIGNTRSTQEQFQAWYEGVKSDYGVDDAGMAILLNGLMVWCIES
FT                   GTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYM
FT                   PRYGLQRNLTDMSLARYAFDFYELHSTTPTRAKEAHMQMKAAALKNAHNRLFGLDGNVS
FT                   TQEEDTERHTATDVTRNIHNLLGMRGVQ"
XX
SQ   Sequence 927 BP; 300 A; 189 C; 226 G; 212 T; 0 other;

hq844112 Length: 927  27-FEB-2013  Type: N  Check: 739  ..

       1  actgaattca aagatgcagt agcaaaccca tcagcaccaa aaccaaaagg
      51  ggcatttaca gcaccagaaa tcacagaggt tactgagcag gaggatccca
     101  aacaagctgc gcttcgcgaa gctagacaga aacaacctgc tgtcacaccc
     151  gaatcatacg gtagagacac aggtgagaaa tctatgcgct ctgtttcacc
     201  acaaagggtg aaagacaagg atgtcaacgt tggcacgaca ggcacatttg
     251  tggttccgcg agttaagctc catactggca aaatgcgcca acctagagtc
     301  aatggaatct ctgtagttaa cttacagcat ctcgcaactt atgaacctga
     351  gcaacataac attgggaata cacgctcaac tcaggaacag tttcaagcat
     401  ggtatgaagg tgtcaagagt gattatggtg ttgatgacgc tggaatggca
     451  atcttgttga atggattgat ggtatggtgc atagagagtg gaacatctcc
     501  aaatataaat ggcgtttgga cgatgatgga tggggatgaa caagtgacgt
     551  accccataaa gccattactg gatcatgcag tgcctacttt taggcaaatc
     601  atgacacact tcagtgacgt tgctgaagcg tatatagaaa tgaggaatcg
     651  caccaaggca tatatgccta ggtatggatt acaacgtaat ttgactgata
     701  tgagtcttgc gcgatatgca tttgatttct atgagctgca ctcaacaaca
     751  cctacacgtg ctaaagaagc acacatgcag atgaaagcag ctgcacttaa
     801  gaatgcgcat aatcggttgt ttggtttgga tggaaacgtc tccacgcaag
     851  aagaggatac ggagaggcac actgcgactg atgttactag aaatatacat
     901  aacctcttag gaatgagggg tgtgcaa