Sequence of DPV Sweet potato feathery mottle virus

Sweet potato feathery mottle virus isolate Ningxia coat protein gene, partial cds.

ACC No: HQ844113

Dated: 2013-02-27 | Length: 933 | CRC: 535805207

                
ID   HQ844113; SV 1; linear; genomic RNA; STD; VRL; 933 BP.
XX
AC   HQ844113;
XX
DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
XX
DE   Sweet potato feathery mottle virus isolate Ningxia coat protein gene,
DE   partial cds.
XX
KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-933
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
XX
RN   [2]
RP   1-933
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .933
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Ningxia"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:12844"
FT   CDS             <1. .>933
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCG7"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCG7"
FT                   /protein_id="AEG79948.1"
FT                   /translation="TEFKDAGADPSAPESKINPPPPTITEIVDPEDPKQAALKAARAKQ
FT                   PATIPESYGRDTSKEKESIVGTSSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQPMVNG
FT                   RAIINFQHLSTYEPEQYEVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLVVWCI
FT                   ENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKA
FT                   YMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQMKAAALKNARNRLFGLDGN
FT                   VSTQEEGTERHTTTDVTRNIHNLLGMRSVQ"
XX
SQ   Sequence 933 BP; 309 A; 183 C; 228 G; 213 T; 0 other;

hq844113 Length: 933  27-FEB-2013  Type: N  Check: 9986  ..

       1  actgaattca aagatgcagg agcagaccct tcagcccctg agtccaagat
      51  caatcctcca ccacctacaa taactgagat cgttgatccg gaggacccga
     101  agcaagcagc tttaaaagct gcacgagcaa agcaacccgc aaccattcca
     151  gaatcatatg ggcgtgatac gagcaaagaa aaggaatcaa tagtgggaac
     201  atcatcaaag ggtgtgagag ataaagacgt taatgttggc acagttggta
     251  catttgttgt accacgtgtt aagatgaatg caaataagaa gagacaacca
     301  atggtcaatg gaagggccat tataaatttc caacacttgt caacatatga
     351  accagagcag tatgaagttg cgaacacccg ttcgacccaa gagcaattcc
     401  aagcatggta tgagggagtt aaaggggatt acggtgttga tgacacagga
     451  atggggatct tattgaatgg actagtggtt tggtgcattg aaaatggcac
     501  atccccaaat ataaatggtg tgtggacaat gatggacggt gatgagcaag
     551  tgacataccc aattaaacca ttgttggatc atgcagtgcc tacttttagg
     601  cagattatga cgcacttcag tgacgttgct gaagcctata tagaaatgcg
     651  aaaccgtaca aaggcgtaca tgccaagata tggtctacaa cgtaatttga
     701  ctgatatgag tcttgcgcga tatgcatttg atttttacga gctgcattca
     751  actacacctg cacgtgctaa agaagcacat ttacagatga aggcagccgc
     801  acttaagaat gcgcgaaatc ggttgtttgg tttggacgga aacgtctcca
     851  cgcaagaaga aggtacggag aggcacacga caactgatgt tactagaaat
     901  atacataacc tcttaggaat gaggagtgtg caa