Sequence of DPV Sweet potato feathery mottle virus

Sweet potato feathery mottle virus isolate Shandong1 coat protein gene, partial cds.

ACC No: HQ844114

Dated: 2013-02-27 | Length: 933 | CRC: -146863827

                
ID   HQ844114; SV 1; linear; genomic RNA; STD; VRL; 933 BP.
XX
AC   HQ844114;
XX
DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
XX
DE   Sweet potato feathery mottle virus isolate Shandong1 coat protein gene,
DE   partial cds.
XX
KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-933
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
XX
RN   [2]
RP   1-933
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .933
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Shandong1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:12844"
FT   CDS             <1. .>933
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCG8"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCG8"
FT                   /protein_id="AEG79949.1"
FT                   /translation="TEFKDAGANPPAPKPKDIPPPPTITEVTDPEDPKQAALRAARAKQ
FT                   PATIPESYGRDTSKEKESIVGASSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQPMVNG
FT                   RAIINFQHLSTYEPEQFEVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCI
FT                   ENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKA
FT                   YMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHLQMKAAALKNAKNRLFGLDGN
FT                   VSTQEEDTERHTTTDVTRNIHNLLGMRGVQ"
XX
SQ   Sequence 933 BP; 301 A; 181 C; 237 G; 214 T; 0 other;

hq844114 Length: 933  27-FEB-2013  Type: N  Check: 2860  ..

       1  actgaattca aagatgctgg agcaaaccct ccagccccta agcctaagga
      51  tatccctcca ccacccacaa taactgaggt tactgatcca gaagacccaa
     101  agcaggcagc tttgagagct gcacgagcta agcaacccgc aactattcca
     151  gaatcatatg gacgagacac tagcaaggag aaggaatcaa tagtgggggc
     201  atcatcaaag ggtgtgaggg ataaagatgt aaacgttggt acagttggta
     251  cgtttgtcgt gccacgtgtt aagatgaatg caaacaagaa aaggcaacca
     301  atggtaaatg gaagggccat tataaatttc caacacttgt caacatatga
     351  gccagaacag tttgaggttg caaacacccg gtcgactcaa gagcagtttc
     401  aagcatggta tgagggagtg aaaggggact atggtgttga tgatacagga
     451  atggggatct tattgaatgg attaatggtt tggtgtattg aaaatggcac
     501  atccccaaat ataaatggtg tgtggactat gatggatggt gatgagcaag
     551  tgacatatcc aattaaacca ttgttggacc atgcagtgcc tacttttagg
     601  cagattatga cgcacttcag tgacgttgct gaagcttaca tagagatgcg
     651  aaaccgtaca aaggcgtaca tgccaaggta tggtctacaa cgtaatttga
     701  ctgatatgag tcttgcgcga tatgcatttg atttctacga gctgcattca
     751  accacccctg cacgtgcaaa agaagcacat ttacagatga aggcggccgc
     801  gcttaagaat gcgaaaaatc ggttgtttgg tttggacgga aacgtctcca
     851  cgcaagaaga agatacggag aggcacacga caactgatgt tactagaaat
     901  atacataacc tcttaggaat gaggggtgtg caa