Sequence of DPV Sweet potato feathery mottle virus

Sweet potato feathery mottle virus isolate Shanxi1 coat protein gene, partial cds.

ACC No: HQ844116

Dated: 2013-02-27 | Length: 927 | CRC: 1401942216

                
ID   HQ844116; SV 1; linear; genomic RNA; STD; VRL; 927 BP.
XX
AC   HQ844116;
XX
DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
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DE   Sweet potato feathery mottle virus isolate Shanxi1 coat protein gene,
DE   partial cds.
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KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-927
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
XX
RN   [2]
RP   1-927
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .927
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Shanxi1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:12844"
FT   CDS             <1. .>927
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCH0"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCH0"
FT                   /protein_id="AEG79951.1"
FT                   /translation="TEFKDAGANPPAPKPKGAFTAPEITEVTEPEDPKQAALREARQKQ
FT                   PAVTPESYGRNTSEKPMRSVSPQRVKDKDVNVGTTGTFLVPRVKLHTSKMRQPRVNGIS
FT                   VVNLQHLATYEPEQHNIGNTRSTQEQFQAWYEGVKGDYGVDDAGMAILLNGLMVWCIEN
FT                   GTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYM
FT                   PRYGLQRNLTDMSLARYAFDFYELHSTTPTRAKEAHMQMKAAALKNAHNRLFGLDGNVS
FT                   TQEEDTERHTATDVTRNIHNLLGMRGVQ"
XX
SQ   Sequence 927 BP; 305 A; 187 C; 221 G; 214 T; 0 other;

hq844116 Length: 927  27-FEB-2013  Type: N  Check: 1308  ..

       1  actgaattca aagatgctgg tgcaaaccca ccagcaccaa aaccaaaagg
      51  ggcatttaca gcaccagaaa tcacagaggt tactgagccg gaggatccca
     101  aacaagctgc gcttcgcgaa gctagacaga aacaacctgc tgtcacaccc
     151  gaatcatacg gtagaaatac aagtgagaaa cctatgcgct ctgtttcacc
     201  acaaagggtg aaagacaagg atgtcaatgt tggtacgaca ggtacatttt
     251  tagtaccacg agttaagctt catactagta aaatgcgcca accgagagtc
     301  aatggaatct ctgtagtaaa cttacaacac cttgcaacct atgaacctga
     351  gcaacataac attgggaata cacgctcaac tcaggaacag tttcaagcat
     401  ggtatgaagg tgtcaagggt gattatggtg ttgatgacgc tggaatggca
     451  atcttgttga atggattgat ggtatggtgc atagagaatg gaacatctcc
     501  aaatataaat ggcgtttgga cgatgatgga tggggatgaa caagtgacgt
     551  accccataaa gccattactg gatcatgcag tgcctacttt taggcaaatc
     601  atgacacact tcagtgacgt tgctgaagcg tatatagaaa tgaggaatcg
     651  caccaaggca tatatgccta ggtatggatt acaacgtaat ttgactgata
     701  tgagtcttgc gcgatatgca tttgatttct atgagctgca ctcaacaaca
     751  cctacacgtg ctaaagaagc acacatgcag atgaaagcag ctgcacttaa
     801  gaatgcgcat aatcggttgt ttggtttgga tggaaacgtc tccacgcaag
     851  aagaggatac ggagaggcac actgcgactg atgttactag aaatatacat
     901  aacctcttag gaatgagggg tgtgcaa