Sequence of DPV Sweet potato feathery mottle virus

Sweet potato feathery mottle virus isolate Shanxi2 coat protein gene, partial cds.

ACC No: HQ844117

Dated: 2013-02-27 | Length: 945 | CRC: 1957415427

                
ID   HQ844117; SV 1; linear; genomic RNA; STD; VRL; 945 BP.
XX
AC   HQ844117;
XX
DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
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DE   Sweet potato feathery mottle virus isolate Shanxi2 coat protein gene,
DE   partial cds.
XX
KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-945
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
XX
RN   [2]
RP   1-945
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .945
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Shanxi2"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:12844"
FT   CDS             <1. .>945
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCH1"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCH1"
FT                   /protein_id="AEG79952.1"
FT                   /translation="SNERTEFKDAGANPPAPKSNINPPPPTITEVVDPEDPKQAALKAA
FT                   RAKQPATIPESYGRDTSKEKESIVGTSSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQP
FT                   MVNGRAIINFQHLSTYEPEQYEVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLM
FT                   VWCIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRN
FT                   RTKAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPARAKEAHMQMKAAALKNAHNRLFG
FT                   LDGNVSTQEEDTERHTATDVTRNIHNLLGMRGVQ"
XX
SQ   Sequence 945 BP; 311 A; 183 C; 232 G; 219 T; 0 other;

hq844117 Length: 945  27-FEB-2013  Type: N  Check: 8148  ..

       1  tctaatgaga gaactgaatt taaagatgct ggagcgaacc ctccagcccc
      51  taagtccaat atcaatcctc caccacctac aataactgag gtcgttgatc
     101  cggaggaccc gaagcaagca gctttaaaag ctgcacgagc aaagcagccc
     151  gcaaccattc cagaatcata tgggcgtgat acgagcaaag aaaaggaatc
     201  aatagtggga acatcatcaa agggtgtgag agataaagac gttaatgttg
     251  gcacagttgg tacatttgtt gtaccacgtg ttaagatgaa tgcaaataag
     301  aagagacaac caatggtcaa tggaagggcc attataaatt tccaacactt
     351  gtcaacatat gaaccagagc agtatgaagt tgcgaacacc cgttcgaccc
     401  aagagcaatt ccaagcatgg tatgagggag ttaaagggga ttacggtgtt
     451  gacgacacag gaatggggat tttattgaat ggactaatgg tttggtgcat
     501  tgaaaatggc acatccccaa atataaatgg tgtgtggaca atgatggacg
     551  gtgatgagca agtgacatat ccaattaaac cattgttgga tcatgcagtg
     601  cctactttta ggcagattat gacgcacttc agtgacgttg ctgaagccta
     651  tatagaaatg cgaaaccgta caaaggcgta catgcctagg tatggattac
     701  aacgtaactt gactgatatg agtcttgcgc gatatgcatt tgatttctat
     751  gagctgcact caacaacacc tgcacgtgct aaagaagcac acatgcagat
     801  gaaagcagct gcacttaaga atgcgcataa tcggttgttt ggtttggatg
     851  gaaacgtctc cacgcaagaa gaggatacgg agaggcacac tgcgactgat
     901  gttactagaa atatacataa cctcttagga atgaggggtg tgcaa