Sequence of DPV Sweet potato latent virus

Sweet potato latent virus isolate Anhui2 coat protein gene, partial cds.

ACC No: HQ844129

Dated: 2013-02-27 | Length: 882 | CRC: 769436294

                
ID   HQ844129; SV 1; linear; genomic RNA; STD; VRL; 882 BP.
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AC   HQ844129;
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DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
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DE   Sweet potato latent virus isolate Anhui2 coat protein gene, partial cds.
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KW   .
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OS   Sweet potato latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-882
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
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RN   [2]
RP   1-882
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .882
FT                   /organism="Sweet potato latent virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Anhui2"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:31743"
FT   CDS             <1. .882
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCI3"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCI3"
FT                   /protein_id="AEG79964.1"
FT                   /translation="ADETIIDTGKVEAKKNRNTEGTPTQTNIPTQPSPSDKGKEVISSK
FT                   GGEITRTPEHDRDINTGTLGTFQVPRLRAIPTKIRLPLVKSGAALNLDHLLVYKPSQLD
FT                   ITNAKATRSQFNQWYEGVKNAYEVDDQQMSILMNGLVVWCIENGTSPNINGDWVMMDGD
FT                   TQVSYPIKPLIDFVAPTFRQIMKRFSDVAEAYIQMRNAEQPYMPRYGLQRNLTDMSLAR
FT                   YAFDFYEVTSRTPIRAKEAYFQMKAAALTNTHHRLFGLDGNVSTTEENTERHTATDVDR
FT                   NIHTLLGMRGIH"
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SQ   Sequence 882 BP; 288 A; 204 C; 202 G; 188 T; 0 other;

hq844129 Length: 882  27-FEB-2013  Type: N  Check: 2885  ..

       1  gccgatgaaa ccatcatcga tactggaaaa gtggaagcaa agaagaatcg
      51  gaacacagag ggcacaccaa cacagactaa cataccaacc cagccaagtc
     101  catcggataa gggtaaggaa gttatatcat caaaaggggg agagattacc
     151  cgcacaccgg aacatgacag agatatcaac actggcaccc tcggaacttt
     201  ccaggtaccc cgcttgcgag caatacccac aaaaattcgt ctgccacttg
     251  tcaaatctgg agctgcattg aatttggatc atctgctagt atataaacca
     301  tcacagctag acataacaaa tgccaaggct acaaggagtc agttcaatca
     351  atggtatgag ggcgtgaaga atgcttatga agtagatgac cagcagatgt
     401  caatcttgat gaatggactt gttgtatggt gtatagagaa tgggacttct
     451  ccaaatatca atggtgattg ggtgatgatg gacggagaca cgcaagtatc
     501  atacccaata aagccactta tagactttgt ggcaccaaca ttccgtcaga
     551  taatgaagcg ctttagcgat gtcgcagaag cctatataca gatgcgcaat
     601  gcagagcaac catacatgcc gagatatggt ttgcaacgga acttaacaga
     651  catgtctctg gctcgttatg ctttcgattt ctacgaggta acatcacgca
     701  cacccattcg cgccaaggaa gcatacttcc agatgaaagc tgcagcgctc
     751  acaaatacac atcatcggct gttcggtctg gatggaaatg tctcaaccac
     801  tgaggaaaac accgagcggc atactgcaac agatgtggac cggaacatac
     851  acacactact tggaatgcgt ggcatccatt ag