Sequence of DPV Sweet potato latent virus

Sweet potato latent virus isolate Hubei3 coat protein gene, partial cds.

ACC No: HQ844134

Dated: 2013-02-27 | Length: 882 | CRC: 500630937

                
ID   HQ844134; SV 1; linear; genomic RNA; STD; VRL; 882 BP.
XX
AC   HQ844134;
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DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
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DE   Sweet potato latent virus isolate Hubei3 coat protein gene, partial cds.
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KW   .
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OS   Sweet potato latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-882
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
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RN   [2]
RP   1-882
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .882
FT                   /organism="Sweet potato latent virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Hubei3"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:31743"
FT   CDS             <1. .882
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCI8"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCI8"
FT                   /protein_id="AEG79969.1"
FT                   /translation="ADETILDAGKVETKKKQNTEGTPPQTSTPTQSGPSDKGKEVISAK
FT                   GGEITRTSEHDRDINTGTLGTFQVPRLRAIPTKIRLPFVKSGAALNLDHLLVYKPSQLD
FT                   ITNAKATRSQFSQWYEGVKNAYEVDDQQMSILMNGLVVWCIENGTSPNINGDWVMMDGD
FT                   TQVSYPIKPLIDFAAPTFRQIMKHFSDVAEAYIQMRNAEQPYMPRYGLQRNLTDMSLAR
FT                   YAFDFYEVTSRTPIRAKEAYFQMKAAALTNTHHRLFGLDGNVSTTEENTERHTATDVDR
FT                   NIHTLLGMRGIH"
XX
SQ   Sequence 882 BP; 288 A; 203 C; 203 G; 188 T; 0 other;

hq844134 Length: 882  27-FEB-2013  Type: N  Check: 1646  ..

       1  gccgatgaaa ccatcctcga tgctggaaaa gtggaaacga agaagaagca
      51  gaacacagaa ggcacaccac cacagactag cacaccaacc cagtcaggtc
     101  cgtcagataa gggcaaggaa gttatatcag caaaaggggg agagattacc
     151  cgcacatcag aacatgacag agatatcaac actggcaccc tcggaacttt
     201  ccaggtaccc cgcttgcgtg caatacccac aaaaattcgt ctgccatttg
     251  tcaaatctgg agctgcattg aacttggatc atctgttagt gtataagcca
     301  tcacagctag acataacgaa tgccaaagct acaaggagtc agttcagtca
     351  atggtatgag ggcgtgaaga atgcttatga agtggatgac cagcagatgt
     401  caatcttgat gaatggactt gttgtatggt gtatagagaa tgggacgtct
     451  ccaaatatca atggtgattg ggtaatgatg gacggagaca cacaagtatc
     501  atacccaata aagccactta tagatttcgc ggcaccaaca tttcgtcaaa
     551  taatgaaaca ttttagcgat gtcgcggaag cctatataca aatgcgcaat
     601  gcagagcaac catacatgcc aagatatggt ttgcaacgga acttaacaga
     651  tatgtctctg gcccgatatg ctttcgattt ttacgaggta acatcacgca
     701  cacccattcg cgccaaggaa gcatacttcc agatgaaagc tgcagcgctc
     751  acaaatacac atcatcggct gttcggtctg gatggaaatg tctcaaccac
     801  tgaggaaaac accgagcggc atactgcaac agatgtggac cggaacatac
     851  acacactact tggaatgcgt ggcatccatt ag