Sequence of DPV Sweet potato latent virus

Sweet potato latent virus isolate Hubei4 coat protein gene, partial cds.

ACC No: HQ844135

Dated: 2013-02-27 | Length: 882 | CRC: 1438438850

                
ID   HQ844135; SV 1; linear; genomic RNA; STD; VRL; 882 BP.
XX
AC   HQ844135;
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DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
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DE   Sweet potato latent virus isolate Hubei4 coat protein gene, partial cds.
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KW   .
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OS   Sweet potato latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-882
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
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RN   [2]
RP   1-882
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .882
FT                   /organism="Sweet potato latent virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Hubei4"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:31743"
FT   CDS             <1. .882
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCI9"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCI9"
FT                   /protein_id="AEG79970.1"
FT                   /translation="ADETILDAGKLETKKKQNTEGTPPQTSTPTQPSPSDKGKEVISAK
FT                   RGEVTRIPEHDRDINTGTLGTFQVPRLRAIPTKIRLPLVKSGAALNLDHLLVYKPSQLD
FT                   ITNAKATRSQFNQWYEGVKNAYEVDDQQMSILMNGLVVWCIENGTSPNINGDWVMMDGD
FT                   TQVSYPIKPLIDFAAPTFRQIMKHFSDVAEAYIQMRNAEQPYMPRYGLQRNLTDMSLAR
FT                   YAFDFYEVTSRTPIRAKEAYFQMKAAALTNTHHRLFGLGGNVSTTEENTERHTATDVDR
FT                   NIHTLLGMRGIH"
XX
SQ   Sequence 882 BP; 283 A; 206 C; 204 G; 189 T; 0 other;

hq844135 Length: 882  27-FEB-2013  Type: N  Check: 3334  ..

       1  gccgatgaaa ccatcctcga tgctggaaaa ttggaaacga agaagaagca
      51  gaacacagaa ggcacaccac cacagactag cacgccaacc cagccaagtc
     101  catcagataa gggtaaggaa gttatatcag caaaaagggg agaggttacc
     151  cgcataccag aacatgacag agatatcaac actggcaccc tcggaacttt
     201  ccaggtaccc cgcttgcgtg caatacccac aaaaattcgt ctgccacttg
     251  tcaaatctgg agctgcattg aacttggatc atctgttagt gtataagcca
     301  tcacagctag acataacaaa tgccaaggct acaaggagtc agttcaatca
     351  atggtatgag ggcgtgaaga atgcttatga agtggatgac cagcagatgt
     401  caatcttgat gaatggactt gttgtatggt gtatagagaa cgggacttct
     451  ccaaatatca atggtgattg ggtgatgatg gacggagaca cgcaagtatc
     501  atacccaata aagccactta tagactttgc tgcaccaaca ttccgtcaga
     551  taatgaagca ctttagcgat gtcgcagaag cctatataca gatgcgcaat
     601  gcagagcaac catacatgcc gagatatggt ttgcaacgga acttaacaga
     651  catgtctctg gctcgttatg ctttcgattt ttacgaggta acatcacgca
     701  cacccattcg cgccaaggaa gcatacttcc agatgaaagc tgcagcgctc
     751  acaaatacac atcatcggct gttcggtctg ggtggaaatg tctcaaccac
     801  tgaggaaaac accgagcggc atactgcaac agatgtggac cggaacatac
     851  acacactact tggaatgcgt ggtatccatt ag