Sequence of DPV Sweet potato latent virus

Sweet potato latent virus isolate Shaanxi1 coat protein gene, partial cds.

ACC No: HQ844148

Dated: 2013-02-27 | Length: 882 | CRC: -1574032269

                
ID   HQ844148; SV 1; linear; genomic RNA; STD; VRL; 882 BP.
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AC   HQ844148;
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DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
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DE   Sweet potato latent virus isolate Shaanxi1 coat protein gene, partial cds.
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KW   .
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OS   Sweet potato latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-882
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
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RN   [2]
RP   1-882
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .882
FT                   /organism="Sweet potato latent virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Shaanxi1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:31743"
FT   CDS             <1. .882
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCK2"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCK2"
FT                   /protein_id="AEG79983.1"
FT                   /translation="ADETIIDAGKVETKKKQNTEGTPPQTNIPTQPSPSDKGKEVISAK
FT                   GGEITRTSEHDRDINTGTLGTFQVPRLRAIPTKIRLPLVKSGAALNLDHLLVYKPSQLD
FT                   ITNAKATRSQFNQWYEGVKNAYEVDDQQMSILMNGLVVWCIENGTSPNINGDWVMMDGD
FT                   TQVSYPIKPLIDFAAPTFRQIMKHFSDVAEAYIQMRNAEQPYMPRYGLQRNLTDMSLAR
FT                   YAFDFYEVTSRTPIRAKEAYFQMKAAALTNTHHRLFGLDGNVSTTEENTERHTATDVDR
FT                   NIHTLLGMRGIH"
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SQ   Sequence 882 BP; 289 A; 193 C; 203 G; 197 T; 0 other;

hq844148 Length: 882  27-FEB-2013  Type: N  Check: 5850  ..

       1  gccgatgaaa ccatcatcga tgctggaaaa gtggaaacga agaagaagca
      51  gaatacagaa ggcacaccac cacagactaa cataccaacc cagccaagtc
     101  catcagataa gggtaaggaa gttatatcag caaaaggggg agagattacc
     151  cgcacatcag aacatgacag agatattaac actggtactc ttggaacttt
     201  ccaggtaccc cgcttgcgtg caatacccac gaaaattcgt ctgccacttg
     251  tcaaatctgg agctgcattg aatctggatc atttgttggt atataaacca
     301  tcacagctgg atataacaaa tgccaaggcc acaaggagtc agttcaatca
     351  atggtatgag ggcgtgaaaa atgcttatga agtggatgat cagcagatgt
     401  cgatcttaat gaatggactt gttgtgtggt gtatagagaa tgggacatct
     451  ccaaacatca atggtgattg ggtgatgatg gatggagaca cacaagtatc
     501  atacccaata aagccactca tagatttcgc ggcaccaaca tttcgccaaa
     551  taatgaagca ctttagtgat gtcgcagaag cctatataca gatgcgcaat
     601  gcagagcaac cgtacatgcc aagatatggt ttgcaacgaa atttaacaga
     651  tatgtctctg gctcgttatg ctttcgattt ctacgaggtg acatcacgca
     701  cacccattcg tgctaaggaa gcatacttcc agatgaaggc tgcagcgctc
     751  acaaatacac atcatcggct gttcggtctg gatggaaatg tctcaaccac
     801  tgaggaaaat accgagcggc atacagcaac agatgtggac cggaacatac
     851  acacactact tggaatgcgt ggcatccatt ag