Sequence of DPV Sweet potato latent virus

Sweet potato latent virus isolate Shaanxi3 coat protein gene, partial cds.

ACC No: HQ844150

Dated: 2013-02-27 | Length: 882 | CRC: 1021078943

                
ID   HQ844150; SV 1; linear; genomic RNA; STD; VRL; 882 BP.
XX
AC   HQ844150;
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DT   07-JUN-2011 (Rel. 109, Created)
DT   27-FEB-2013 (Rel. 115, Last updated, Version 4)
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DE   Sweet potato latent virus isolate Shaanxi3 coat protein gene, partial cds.
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KW   .
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OS   Sweet potato latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-882
RX   PUBMED; 23053527.
RA   Qin Y., Zhang Z., Qiao Q., Zhang D., Tian Y., Wang Y.;
RT   "Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and
RT   five potyviruses infecting sweet potato in China";
RL   Arch. Virol. 158(2):491-495(2013).
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RN   [2]
RP   1-882
RA   Qin Y.H., Zhang Z.C., Qiao Q., Zhang D.S., Tian Y.T., Wang Y.J.;
RT   ;
RL   Submitted (29-DEC-2010) to the INSDC.
RL   Institute of Plant Protection, Henan Academy of Agricultural Sciences, 1
RL   Nongye Road, Zhengzhou, Henan 450002, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .882
FT                   /organism="Sweet potato latent virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Shaanxi3"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:31743"
FT   CDS             <1. .882
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8TCK4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8TCK4"
FT                   /protein_id="AEG79985.1"
FT                   /translation="ADETIIDAGKLETKKKQNTGGTPPQTNTPTQPSPSDKGKEVISAK
FT                   RGEVTRTPEHDRDINTGTLGTFQVPRLRAIPTKIRLPLVKSGAALNLDHLLVYKPSQLD
FT                   ITNAKATRSQFTQWYEGVKNAYEVDDQQMSILMNGLVVWCIENGTSPNINGDWVMMDGD
FT                   AQVSYPIKPLIDFAAPTFRQIMKHFSDVAEAYIQMRNAEQPYMPRYGLQRNLTDMSLAR
FT                   YAFDFYEVTSRTPIRAKEAYFQMKAAALTNTHHRLFGLDGNVSTTEENTERHTATDVDR
FT                   NIHTLLGMRGIH"
XX
SQ   Sequence 882 BP; 284 A; 201 C; 205 G; 192 T; 0 other;

hq844150 Length: 882  27-FEB-2013  Type: N  Check: 3811  ..

       1  gccgatgaaa ccatcatcga tgctggaaaa ttggaaacga agaagaagca
      51  gaacacagga ggcacaccac cacagactaa cacgccaacc cagccaagtc
     101  catcagataa gggtaaggaa gttatatcag caaaaagggg agaggttacc
     151  cgcacaccag aacatgacag agatatcaac actggcaccc tcggaacttt
     201  ccaggtacct cgcttgcgtg caatacccac aaaaattcgt ttgccgcttg
     251  tcaaatctgg agctgcattg aatttggatc atctgttagt atataagcca
     301  tcacaactag atataacaaa tgccaaggct acaaggagcc agtttactca
     351  atggtatgag ggtgtgaaga atgcttacga agtggatgac cagcagatgt
     401  caatcttgat gaatgggctt gttgtatggt gtatagagaa tgggacgtct
     451  ccaaatatca atggtgattg ggtaatgatg gacggagacg cacaagtatc
     501  atacccaata aagccactca tagatttcgc ggcaccaaca tttcgccaaa
     551  taatgaagca ctttagcgat gtcgcggaag cctatataca gatgcgcaat
     601  gcagagcaac catacatgcc aagatatggt ttgcaacgga acttaacaga
     651  tatgtctctg gctcgttatg ctttcgattt ctatgaggtg acatcacgca
     701  cacccattcg tgctaaggaa gcatacttcc agatgaaggc tgcagcgctc
     751  acaaatacac atcatcggct gttcggtctg gatggaaatg tctcaaccac
     801  tgaggaaaac accgagcggc atactgcaac agatgtggac cggaacatac
     851  acacactact tggaatgcgt ggcatccatt ag