Sequence of DPV Soybean mosaic virus

Soybean mosaic virus strain IA P3 gene, partial cds.

ACC No: HQ845726

Dated: 2013-01-06 | Length: 1197 | CRC: -118612987

                
ID   HQ845726; SV 1; linear; genomic RNA; STD; VRL; 1197 BP.
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AC   HQ845726;
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DT   06-JAN-2013 (Rel. 115, Created)
DT   06-JAN-2013 (Rel. 115, Last updated, Version 1)
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DE   Soybean mosaic virus strain IA P3 gene, partial cds.
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KW   .
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OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1197
RX   DOI; 10.1111/j.1364-3703.2012.00817.x.
RX   PUBMED; 22827506.
RA   Khatabi B., Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   "Evaluation of North American isolates of Soybean mosaic virus for gain of
RT   virulence on Rsv-genotype soybeans with special emphasis on
RT   resistance-breaking determinants on Rsv4";
RL   Mol. Plant Pathol. 13(9):1077-1088(2012).
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RN   [2]
RP   1-1197
RA   Khatabi B., Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   ;
RL   Submitted (02-JAN-2011) to the INSDC.
RL   Entomology and Plant Pathology, University of Tennessee, 2431 Joe Johnson
RL   Drive, 205 Ellington Plant Sci. Bldg., Knoxville, TN 37996-4560, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1197
FT                   /organism="Soybean mosaic virus"
FT                   /host="soybean; genotype V94-5152 (Rsv4)"
FT                   /strain="IA"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>1197
FT                   /codon_start=1
FT                   /product="P3"
FT                   /protein_id="AEW48068.1"
FT                   /translation="GEVQQRMKCETALITSIFKPKRMIQILENDPYILLMGLVSPSILI
FT                   HMYRMKHFEKGVELWISKEHSVAKIFIILEQLTKRVAANDVLLEQLEMISETSERFMSI
FT                   LEDCPQAPHSYKTAKDLLTMYIERKASNNQLVENGFVDMNDKLYMAYEKIYSDRLKQEW
FT                   RALSWLEKFSITWQLKRFAPHTEKCLTKKVVEESSASSGNFASVCFMNAQSHLRNVRNT
FT                   LFQKCDQVWTASVRAFVRLIISTLHRCYSDIVYLVNICIIFSLLVKMTSVLQGIVNTAR
FT                   RDKALLSGWKRKEDEEAVIHLYEMCEKMEGGHPSIEKFLDHVKGVRPDLLPVAVSMTGQ
FT                   SEDVSAQAKTATQLQLEKIVAFMALLTMCIDNERSDAVFKVLSKLKAFFSTMGEDVKVQ
FT                   "
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SQ   Sequence 1197 BP; 403 A; 197 C; 280 G; 317 T; 0 other;

hq845726 Length: 1197  06-JAN-2013  Type: N  Check: 8632  ..

       1  ggtgaagtgc aacagagaat gaagtgtgaa acagcactta taacaagcat
      51  tttcaaaccg aagagaatga ttcaaatcct tgaaaatgac ccatacattc
     101  tcttgatggg cttggtttca ccttctatct tgattcacat gtatcgtatg
     151  aagcattttg agaaaggggt ggagttgtgg ataagtaaag aacatagtgt
     201  ggcaaagatt ttcatcatat tggaacaact cactaagagg gtcgctgcaa
     251  atgatgtgct acttgagcaa ctcgaaatga tctcagaaac ttctgagagg
     301  ttcatgagta tcttagagga ttgccctcaa gcaccacatt catacaagac
     351  agcaaaagat ttgttgacaa tgtacataga aagaaaagca tccaacaacc
     401  aattggtgga gaatggtttt gtagacatga atgacaaatt gtacatggca
     451  tatgaaaaaa tctactcaga tcgcttgaag caggaatggc gcgcattaag
     501  ctggttggaa aaattttcta taacatggca attgaaaaga tttgctccac
     551  atacggagaa atgtttgaca aagaaagttg tagaagaaag cagcgcatct
     601  tcaggaaact ttgcgagtgt gtgcttcatg aatgcccagt cacacctaag
     651  aaatgtaaga aatacacttt tccaaaaatg tgaccaggtt tggactgcat
     701  cggtgcgagc ctttgtgagg ctcataatct caacacttca caggtgctac
     751  agtgatatag tttatctggt aaacatctgt ataatctttt cattgcttgt
     801  caaaatgact agtgtactgc agggcattgt caacacagca aggagagaca
     851  aagcactctt aagtggatgg aaaaggaaag aagatgaaga ggccgtgatt
     901  catttgtatg aaatgtgtga aaagatggaa ggtggacatc caagtattga
     951  gaaatttttg gaccatgtca agggagttag acctgatcta ctccctgtgg
    1001  cagtaagcat gacaggacaa tcagaagatg tctccgcaca ggccaaaaca
    1051  gcaactcaat tgcaacttga gaaaattgtg gcattcatgg ctttgttgac
    1101  catgtgtatt gataatgaaa ggagtgatgc ggttttcaaa gtattgagta
    1151  agttaaaggc atttttcagc acaatgggtg aggatgttaa agtgcag