Sequence of DPV Soybean mosaic virus

Soybean mosaic virus strain IL3 P3 gene, partial cds.

ACC No: HQ845727

Dated: 2013-01-06 | Length: 1197 | CRC: 983100874

                
ID   HQ845727; SV 1; linear; genomic RNA; STD; VRL; 1197 BP.
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AC   HQ845727;
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DT   06-JAN-2013 (Rel. 115, Created)
DT   06-JAN-2013 (Rel. 115, Last updated, Version 1)
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DE   Soybean mosaic virus strain IL3 P3 gene, partial cds.
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KW   .
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OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1197
RX   DOI; 10.1111/j.1364-3703.2012.00817.x.
RX   PUBMED; 22827506.
RA   Khatabi B., Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   "Evaluation of North American isolates of Soybean mosaic virus for gain of
RT   virulence on Rsv-genotype soybeans with special emphasis on
RT   resistance-breaking determinants on Rsv4";
RL   Mol. Plant Pathol. 13(9):1077-1088(2012).
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RN   [2]
RP   1-1197
RA   Khatabi B., Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   ;
RL   Submitted (02-JAN-2011) to the INSDC.
RL   Entomology and Plant Pathology, University of Tennessee, 2431 Joe Johnson
RL   Drive, 205 Ellington Plant Sci. Bldg., Knoxville, TN 37996-4560, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1197
FT                   /organism="Soybean mosaic virus"
FT                   /host="soybean; genotype V94-5152 (Rsv4)"
FT                   /strain="IL3"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>1197
FT                   /codon_start=1
FT                   /product="P3"
FT                   /protein_id="AEW48069.1"
FT                   /translation="GEVQQRMKCETALITSIFRPKRMVQILENDPYILLMGLVSPSILI
FT                   HMYRMKHFEKGVELWISKEHSVAKIFIILEQLTKRVAANDVLLEQLEMISETSERFMSI
FT                   LEDCPQAPQSYKTAKDLLTMYIERKASNSQLVENGFVDMNDKLYMAYEKIYSDRLKQEW
FT                   RALSLLEKFSTTWQLKRFAPHTEKCLTKKVVEESSASSGNFANVCFMNAQSHLRNVRNT
FT                   LFQKCDQVWTASVRAFVRFIISTLHRCYSDIVYLVNICIIFSLLVQMTSVLQGIVNTAR
FT                   RDKALLNRWKRKEDEEAVIHLYEMCEKMEGGHPSIEKFLDHVKGVRPDLLPIAVSMTGQ
FT                   SEDVSAQAKTATQLQLEKIVAFMALLTMCIDNERSDAVFKVLSKLKTFFSTMGEDVKVQ
FT                   "
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SQ   Sequence 1197 BP; 403 A; 198 C; 279 G; 317 T; 0 other;

hq845727 Length: 1197  06-JAN-2013  Type: N  Check: 1926  ..

       1  ggtgaagtgc aacaaaggat gaagtgtgaa acagcactca taacaagcat
      51  tttcagacct aagagaatgg ttcaaatcct tgagaatgac ccatacattc
     101  ttttgatggg cttggtttca ccttctattc tgattcacat gtatcgcatg
     151  aagcattttg agaaaggggt ggagttgtgg ataagtaaag aacatagtgt
     201  ggcaaagatt ttcatcatat tggaacaact cactaagagg gtcgctgcaa
     251  atgacgtgtt acttgagcaa cttgaaatga tttcagaaac ttctgagaga
     301  ttcatgagca ttctagagga ctgtcctcaa gcgccacagt catacaagac
     351  ggcaaaagat ttgttgacaa tgtacataga aagaaaagca tctaatagcc
     401  aattggtgga gaatggtttt gtagacatga atgataaact gtatatggca
     451  tatgaaaaaa tctactcaga tcgcttgaaa caggaatggc gcgcattaag
     501  cttgttggaa aaattttcta caacatggca attgaaaaga tttgctccac
     551  atacggagaa atgtttgaca aagaaagttg tagaagaaag cagcgcatct
     601  tcaggaaact ttgcgaatgt gtgcttcatg aatgcccagt cacacctaag
     651  aaatgtaaga aatacacttt ttcaaaaatg tgaccaggtt tggaccgcat
     701  cggtgcgagc ctttgtgagg ttcataattt caacacttca caggtgctat
     751  agtgatatag tttatctggt gaacatctgc ataatctttt cattgcttgt
     801  ccaaatgacc agtgtgctgc agggtattgt caacacagca aggagggaca
     851  aagcactctt aaatagatgg aaaaggaaag aagatgaaga ggccgtgatt
     901  catttgtatg aaatgtgtga aaagatggaa ggtggacatc caagtattga
     951  aaaatttttg gaccatgtca agggagttag acccgattta ctccctatag
    1001  cagtgagcat gacaggacaa tcagaagatg tctccgcaca ggccaaaaca
    1051  gcaactcaat tgcaacttga gaaaattgtg gcattcatgg ctttgttgac
    1101  catgtgcata gataatgaaa ggagtgatgc ggtcttcaaa gtattgagca
    1151  aattaaagac attcttcagc acaatgggtg aggatgttaa agtgcag