Sequence of DPV Rice black streaked dwarf virus
Rice black streaked dwarf virus isolate HBzhaoxian1 capsid protein gene, complete cds.
ACC No: HQ916883
Dated: 2011-07-26 | Length: 1677 | CRC: -1547921694
ID HQ916883; SV 1; linear; genomic RNA; STD; VRL; 1677 BP.
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AC HQ916883;
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DT 26-JUL-2011 (Rel. 109, Created)
DT 26-JUL-2011 (Rel. 109, Last updated, Version 1)
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DE Rice black streaked dwarf virus isolate HBzhaoxian1 capsid protein gene,
DE complete cds.
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KW .
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OS Rice black streaked dwarf virus
OC Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Fijivirus;
OC Fijivirus group 2.
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RN [1]
RP 1-1677
RA Gao R.Z., Cheng Z.B., Zhou Y.J.;
RT ;
RL Submitted (23-JAN-2011) to the INSDC.
RL Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences,
RL No. 50.Zhongling Road, Nanjing, Jiangsu 210014, China
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FH Key Location/Qualifiers
FH
FT source 1. .1677
FT /organism="Rice black streaked dwarf virus"
FT /segment="10"
FT /host="maize"
FT /isolate="HBzhaoxian1"
FT /mol_type="genomic RNA"
FT /country="China"
FT /collection_date="Aug-2009"
FT /db_xref="taxon:10990"
FT CDS 1. .1677
FT /codon_start=1
FT /product="capsid protein"
FT /protein_id="AEK67393.1"
FT /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHE
FT LNIVKSPHVASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQ
FT PIFQTLTNNDLSEEFVGVTTFGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGL
FT EVILDDSYIGIVGKIPGLEVHKLLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDF
FT NCPASTTDVTHYGGYDQFSRQMFERLNLFYNISLSIIPVSALKTVHLFEKELSVLDADK
FT SLLEQTWSAVASFVETWQVKSKVKADDPDEYELTSLSTLRTNYDGTSASSPFTDKKFID
FT WYIKTFSKTEKGSSLRRNELEEKSATSTSTTVKKVKIHFSVQYFDEFKVNGHEKSVVVQ
FT THKGEMTLDYYRKIGEVLSAIWKRGKSLAVPCFDYIKLGVEKAFHLAPVILKKYNLTID
FT DIINFIDKGPSYLAKLDKIDDWSLISKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT NNLLKSDRDRLLKKALSANVSSSNTSSHEHVQKIVLNKVTR"
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SQ Sequence 1677 BP; 548 A; 301 C; 294 G; 534 T; 0 other;
hq916883 Length: 1677 26-JUL-2011 Type: N Check: 2404 ..
1 atggctgaca taagactcga catagcgccc gatcttatcc ataatggtgt
51 accccagaga ctttccgata caataatttt aaacaaccga ccaacaatca
101 ctctgctctc tcatttcaac aatctatttc atgaactaaa cattgtcaaa
151 tcgccccacg ttgcatcttc ccaaactact gttaatttgt acattcgtaa
201 gcatttgttg acccgacttc atgatagact acaaaccgta gaaactagca
251 ctttgcccaa cattacacaa cttaaagacc atattcgtag cttttttcaa
301 aatgaacacc aacctatttt tcagacccta acgaacaacg acctaagtga
351 agaatttgta ggtgtgacta cttttggact aagcttattt gctacctcca
401 aacttgatgc tgaacaaata gaacgtgtac aaattgagac cctaactgaa
451 ggaaacatta ctttgaaacc cttttctgct gatggtttag aagtcattct
501 tgatgatagt tatattggta tagttggtaa aattccaggt ttagaagttc
551 ataaattgct agataaatgt tgtcgtgaag ttcctgctca aatgggaata
601 cttactgatg aagttaaact tttgatgcgt actggtaaat taagaattga
651 tggtggttac gattttaatt gtcctgcaag cactactgat gttacacatt
701 atggtggtta tgaccaattt tcacgtcaaa tgttcgaacg cttgaatcta
751 ttttataaca ttagccttag cataattccc gtttcagctt tgaaaacagt
801 tcatttattt gaaaaagaac taagtgtttt agatgcagat aaatctttac
851 tcgaacaaac ttggagcgcg gtagcgtcat ttgttgaaac ttggcaggtt
901 aaatctaaag ttaaagccga tgatccagat gaatatgaat tgaccagttt
951 gtccactttg cgcactaatt acgatggcac ctctgcttct agtcctttta
1001 cagataagaa attcattgat tggtacatta agactttttc taagactgag
1051 aaaggatcgt cgttgcgtcg aaacgaatta gaagagaaaa gtgccactag
1101 tacttcaact acagtaaaga aggtgaaaat tcatttctcc gttcaatatt
1151 ttgatgaatt taaagttaat ggacatgaaa aaagcgttgt agttcaaact
1201 cataaaggtg aaatgacgtt agattattat cgtaaaattg gcgaagtgtt
1251 aagtgctatt tggaaacgtg gtaaatcttt ggctgtacct tgttttgatt
1301 acattaagct tggcgttgag aaagcatttc atttagcacc cgtaattctg
1351 aagaagtata atttgactat tgatgacatt atcaacttta ttgataaagg
1401 accttcttat ttagctaaat tagacaagat tgatgattgg tctttaattt
1451 caaagctcat cattaccagc gttttaccta atatcattca agctgtttac
1501 aaaactgatc caagtaataa tgttatgaac tcagtaatca tcagtagagc
1551 gaacaatttg ttgaaatctg atagggacag gctattaaag aaggcacttt
1601 ccgccaacgt ttcttcttcc aacacatcta gtcatgaaca tgtacagaag
1651 atagtactaa acaaagtgac aagatga