Sequence of DPV Groundnut bud necrosis virus

Groundnut bud necrosis virus isolate GBNV_Pea_BRY nucleocapsid protein (NP) gene, complete cds.

ACC No: JF281101

Dated: 2011-05-09 | Length: 831 | CRC: 440717025

                
ID   JF281101; SV 1; linear; genomic RNA; STD; VRL; 831 BP.
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AC   JF281101;
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DT   09-MAY-2011 (Rel. 108, Created)
DT   09-MAY-2011 (Rel. 108, Last updated, Version 1)
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DE   Groundnut bud necrosis virus isolate GBNV_Pea_BRY nucleocapsid protein (NP)
DE   gene, complete cds.
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KW   .
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OS   Groundnut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-831
RA   Akram M., Naimuddin;
RT   "Sequence variability in NP and NSm genes of GBNV isolates causing tip
RT   necrosis in pea";
RL   Unpublished.
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RN   [2]
RP   1-831
RA   Akram M., Naimuddin;
RT   ;
RL   Submitted (01-FEB-2011) to the EMBL/GenBank/DDBJ databases.
RL   Crop Protection, Indian Institute of Pulses Research, Kalyanpur, Kanpur, UP
RL   208024, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Groundnut bud necrosis virus"
FT                   /host="Pisum sativum (pea)"
FT                   /isolate="GBNV_Pea_BRY"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Bareilly District of Uttar Pradesh"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:198612"
FT   gene            1. .831
FT                   /gene="NP"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /gene="NP"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AEE00185.1"
FT                   /translation="MSNVKQLTEKKIKELLSGGSADVEIETEDSTPGFSFKAFYDANKS
FT                   LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM
FT                   ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKAGPSLEL"
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SQ   Sequence 831 BP; 274 A; 141 C; 177 G; 239 T; 0 other;

jf281101 Length: 831  09-MAY-2011  Type: N  Check: 5231  ..

       1  atgtctaacg tcaagcaact gaccgagaag aaaatcaaag aacttttgtc
      51  tggtggctct gcagatgttg aaattgaaac agaagattcc actcctggat
     101  ttagctttaa agctttctac gacgctaaca aaagtcttga aataactttc
     151  acaaactgtt tgaatatttt gaagtgcagg aagcagatct ttgctgcttg
     201  taaaagtggt aagtatgttt tttgtggtaa aactattgtt gctacaaata
     251  ctgacgtagg gccagatgac tggaccttca aaaggacaga agctttcatc
     301  agaaccaaaa tggctagtat ggttgagaag agtaagaatg atgctgctaa
     351  gcaggagatg tataataaaa taatggaatt accattagtg gcagcttatg
     401  gattaaatgt ccctgcatct ttcgatacat gtgctttaag gatgatgctc
     451  tgcattggag gtcctctgcc tctcttgtct agcatgacag gtctggcacc
     501  aattatattc cctctggctt attatcaaaa tgtgaagaaa gagaaattag
     551  gaattaagaa cttttctact tatgaacagg tttgcaaagt agccaaagta
     601  ctttctgctt cacagattga attcaaaaat gaactagagg aaatgtttaa
     651  atcagctgta aagctattga gtgagagcaa ccctggaaca gccagctcta
     701  tctcactcaa gaaatatgat gaacaagtca aatacatgga caaagctttc
     751  agtgccagtc tctcaatgga tgattatggt gaacattcta agaagaagag
     801  ttcaaaggct ggtccttcgc tggaattgta a